RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ERVK-6Q9BXR3 956 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 RAPGEFL1Q9UHV5 662 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 PGRMC2O15173 223 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ADAMDEC1O15204 470 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 RGS10O43665 173 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 TOP3BO95985 862 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 AHSGP02765 367 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SAGP10523 405 aaPredicted RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 NT5EP21589 574 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 PRKCHP24723 683 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 CMPK1P30085 196 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 ACVRL1P37023 503 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SNAPC1Q16533 368 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 ZC3HC1Q86WB0 502 aaKnown RBP11.33□□□□□ -0.6
NOD1-201ENST00000222823 PIK3C3Q8NEB9 887 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SLC38A4Q969I6 547 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 NEK6Q9HC98 313 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 SLC7A8Q9UHI5 535 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 HS3ST4Q9Y661 456 aa11.33□□□□□ -0.6
NOD1-201ENST00000222823 UNCXA6NJT0 531 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 SLC35G6P0C7Q6 338 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 ERVK-8P63133 956 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 PAFAH1B3Q15102 231 aaKnown RBP11.32□□□□□ -0.6
NOD1-201ENST00000222823 VITQ6UXI7 678 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 PYCR2Q96C36 320 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 CHID1Q9BWS9 393 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 SMOC2Q9H3U7 446 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 DPEP2Q9H4A9 486 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
NOD1-201ENST00000222823 ZNF487B1APH4 448 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 PTPN5P54829 565 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 GRB14Q14449 540 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 CARD16Q5EG05 197 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 TNFAIP8L3Q5GJ75 292 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 LDLRAP1Q5SW96 308 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 FAM92BQ6ZTR7 304 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 AP3S1Q92572 193 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 PTPN18Q99952 460 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 C11orf84Q9BUA3 381 aaPredicted RBP11.32□□□□□ -0.6
NOD1-201ENST00000222823 TMEM27Q9HBJ8 222 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 SLC22A2O15244 555 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 FADS2O95864 444 aaKnown RBP11.32□□□□□ -0.6
NOD1-201ENST00000222823 MAT2AP31153 395 aaKnown RBP11.32□□□□□ -0.6
NOD1-201ENST00000222823 PLA2G16P53816 162 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 ACTR3P61158 418 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 ECT2LQ008S8 904 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 DPY19L1Q2PZI1 675 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 ZNF792Q3KQV3 632 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 SIRPB2Q5JXA9 342 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 DCST1Q5T197 706 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 RNF220Q5VTB9 566 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 TAF8Q7Z7C8 310 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 NSMCE3Q96MG7 304 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 CYTH4Q9UIA0 394 aa11.32□□□□□ -0.6
NOD1-201ENST00000222823 LRRC72A6NJI9 287 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 A8MT66 165 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PRKCGP05129 697 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CDH3P22223 829 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 MTPNP58546 118 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 GPR17Q13304 367 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CCNIQ14094 377 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 TEAD4Q15561 434 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 TMEM63BQ5T3F8 832 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 AMZ2Q86W34 360 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PQLC3Q8N755 202 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 HM13Q8TCT9 377 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 AUTS2Q8WXX7 1259 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 TRIM63Q969Q1 353 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 C8orf48Q96LL4 319 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 OR2AG1Q9H205 316 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 OSER1Q9NX31 292 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 SLX4Q8IY92 1834 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 H3BNX3 289 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CXCR6O00574 342 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CLDN4O14493 209 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ITM2AO43736 263 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 DLX3O60479 287 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PROZP22891 400 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 YAP1P46937 504 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 GALNT2Q10471 571 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 HSPB3Q12988 150 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 PYDC2Q56P42 97 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 NAPRTQ6XQN6 538 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 IGDCC3Q8IVU1 814 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZZZ3Q8IYH5 903 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 FAM98AQ8NCA5 519 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 ZMIZ2Q8NF64 920 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 ABCG4Q9H172 646 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 GALPQ9UBC7 116 aa11.31□□□□□ -0.6
NOD1-201ENST00000222823 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
NOD1-201ENST00000222823 PPIEQ9UNP9 301 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms