RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SH2D5Q6ZV89 423 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 CLEC14AQ86T13 490 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC35F3Q8IY50 421 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 ASB11Q8WXH4 323 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 TSNARE1Q96NA8 513 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 HGH1Q9BTY7 390 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 ACBD3Q9H3P7 528 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 CPNE7Q9UBL6 633 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 CIDEBQ9UHD4 219 aa26.57■■□□□ 1.84
CHMP4B-201ENST00000217402 TFEBP19484 476 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 ATP6V0D1P61421 351 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 TSNQ15631 228 aaKnown RBP26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 C14orf28Q4W4Y0 310 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 UBE2R2Q712K3 238 aaPredicted RBP26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 GOLGA6L1Q8N7Z2 621 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 GPR156Q8NFN8 814 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 SETD7Q8WTS6 366 aaKnown RBP26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 STMN4Q9H169 189 aaPredicted RBP26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 TRIT1Q9H3H1 467 aaKnown RBP26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 NMRAL1Q9HBL8 299 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 HEBP2Q9Y5Z4 205 aa26.56■■□□□ 1.84
CHMP4B-201ENST00000217402 PSIP1O75475 530 aaKnown RBP26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 VIPP01282 170 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 GRK6P43250 576 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 PRKG2Q13237 762 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 BIRC2Q13490 618 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 INAVAQ3KP66 663 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 TNFAIP8L3Q5GJ75 292 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC9B2Q86UD5 537 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 ARL14Q8N4G2 192 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 DLG3Q92796 817 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 ARL8AQ96BM9 186 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 PTERQ96BW5 349 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 APOLD1Q96LR9 279 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 SMC6Q96SB8 1091 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 ALG9Q9H6U8 611 aa26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 NOVA2Q9UNW9 492 aaKnown RBP26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 TDRKHQ9Y2W6 561 aaKnown RBP26.55■■□□□ 1.84
CHMP4B-201ENST00000217402 KRT87PA6NCN2 255 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 ARHGEF33A8MVX0 844 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 FLRT2O43155 660 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 OPA1O60313 960 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 C1orf105O95561 183 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 CATP04040 527 aaKnown RBP26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 C8GP07360 202 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 COL6A2P12110 1019 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 CD59P13987 128 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 CREB1P16220 341 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 XRCC1P18887 633 aaPredicted RBP26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 UBE2IP63279 158 aaKnown RBP26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 HHEXQ03014 270 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC14A1Q13336 389 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 EEF1AKMT2Q5JPI9 291 aaKnown RBP26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 KLC3Q6P597 504 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 OR5K2Q8NHB8 316 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 GPR78Q96P69 363 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 SENP1Q9P0U3 644 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 COPEO14579 308 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 GFRA3O60609 400 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 RPN2P04844 631 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 MAPK9P45984 424 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC18A2Q05940 514 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 SP140Q13342 867 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 OR4D1Q15615 310 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 PHKG1Q16816 387 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 CCSMST1Q4G0I0 132 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 EXOC3L1Q86VI1 746 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 C17orf82Q86X59 251 aaPredicted RBP26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 DCUN1D3Q8IWE4 304 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 TBC1D21Q8IYX1 336 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 SCYL1Q96KG9 808 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 SH3GL2Q99962 352 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 MVB12BQ9H7P6 319 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 POT1Q9NUX5 634 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 UTP6Q9NYH9 597 aaKnown RBP26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 COLEC10Q9Y6Z7 277 aa26.54■■□□□ 1.84
CHMP4B-201ENST00000217402 GFYI3L273 518 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 SPAG7O75391 227 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 MAP4P27816 1152 aaKnown RBP26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 TSNAXIP1Q2TAA8 658 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 STPG1Q5TH74 334 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 SBSNQ6UWP8 590 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 DBX2Q6ZNG2 339 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 ADAMTSL2Q86TH1 951 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 ZNF761Q86XN6 746 aaPredicted RBP26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 JPH3Q8WXH2 748 aaPredicted RBP26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 KIAA1191Q96A73 305 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 STN1Q9H668 368 aaKnown RBP26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 SLC40A1Q9NP59 571 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 PLAGL1Q9UM63 463 aa26.53■■□□□ 1.84
CHMP4B-201ENST00000217402 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 SYF2O95926 243 aaKnown RBP26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 CYP2A7P20853 494 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 ACAP2Q15057 778 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 CDHR3Q6ZTQ4 885 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 FRA10AC1Q70Z53 315 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 ISCA2Q86U28 154 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 RASGRP3Q8IV61 690 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 NAXDQ8IW45 347 aa26.52■■□□□ 1.84
CHMP4B-201ENST00000217402 RHBDD1Q8TEB9 315 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms