RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Slc39a10Q6P5F6 833 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Glt28d2Q8BML3 165 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ncs1Q8BNY6 190 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Atp6v1hQ8BVE3 483 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ldhal6bQ8BVP2 382 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Lurap1lQ8K2P1 221 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr1311Q8VET0 312 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sult5a1Q91X36 291 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ptgr1Q91YR9 329 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zfp84Q9D654 559 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 PrebQ9WUQ2 417 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 DnpepQ9Z2W0 473 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fam166bA2AIP0 273 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Xlr5bA2BI50 236 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ttc23lA6H6E9 458 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm28048F7BCN0 99 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm17174M0QWQ9 212 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Suv39h1O54864 412 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Vipr1P97751 459 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Myl12bQ3THE2 172 aaKnown RBP12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pou4f2Q63934 411 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Znf366Q6NS86 746 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fndc3bQ6NWW9 1207 aaKnown RBP12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 ZfatQ7TS63 1237 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fbxo9Q8BK06 437 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Arhgap22Q8BL80 702 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Vwa1Q8R2Z5 415 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ndufs1Q91VD9 727 aaKnown RBP12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Uxs1Q91XL3 420 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ilf2Q9CXY6 390 aaKnown RBP12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cntd1Q9D995 334 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Elovl2Q9JLJ4 292 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 DguokQ9QX60 277 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 A0A286YD17 136 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Klhdc7bA0A286YD60 1263 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sppl2cA2A6C4 690 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm13040A2A8C4 496 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fam131cA2ADB2 273 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm13101A2ASJ0 481 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm13119B1ARV5 481 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Catsperg2C6KI89 1145 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Vmn2r4K7N784 913 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sult3a1O35403 293 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Adamts1P97857 968 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zfp935Q14DI0 353 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Upf3aQ3ULJ3 422 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tapt1Q4VBD2 564 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Brsk1Q5RJI5 778 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 WtipQ7TQJ8 398 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Znf423Q80TS5 1292 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rbbp8Q80YR6 893 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Trnp1Q80ZI1 223 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slitrk6Q8C110 840 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Atxn7l2Q8C8K6 696 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MfrpQ8K480 584 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slc30a5Q8R4H9 761 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 RhoqQ8R527 205 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cyp2j9Q924D1 502 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Eif3mQ99JX4 374 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Riok2Q9CQS5 547 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Panx1Q9JIP4 426 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 4930579F01RikE9Q3L6 325 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rnf169E9Q7F2 694 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Obox5G3X9P6 291 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm3642K7N6V4 267 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 E2f2P56931 443 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Trim45Q6PFY8 580 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 NanogQ80Z64 305 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fstl5Q8BFR2 847 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slc7a4Q8BLQ7 635 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zcchc9Q8R1J3 271 aaKnown RBP12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Use1Q9CQ56 270 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Q9CZV2 255 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ttc25Q9D4B2 624 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Q9D5Y0 588 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Wfdc1Q9ESH5 211 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 NinQ61043 2035 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zswim8Q3UHH1 1832 aaKnown RBP12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Znf518bB2RRE4 1077 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tmem233D3Z1U7 110 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Vmn2r96E9PZU5 664 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm3476K7N6V0 257 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm12794L7MTS5 483 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ncam1P13595 1115 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gadd45aP48316 165 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rps7P62082 194 aaKnown RBP12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rgs16P97428 201 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Il6stQ00560 917 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Snx31Q6P8Y7 439 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Scn4bQ7M729 228 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Wipi2Q80W47 445 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zbtb46Q8BID6 600 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 SgtaQ8BJU0 315 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Acad9Q8JZN5 625 aaKnown RBP12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Prrg2Q8R182 198 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr1467Q8VFW1 308 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Usb1Q91W78 267 aa12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 DarsQ922B2 501 aaKnown RBP12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Fam32aQ9CR80 112 aaKnown RBP12.53□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tex19.2Q9D5S1 317 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms