RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RAP2CQ9Y3L5 183 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 CCT8L1PA6NM43 557 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 STX16-NPEPL1H3BU86 382 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 STX16O14662 325 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 RAD51BO15315 384 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 VEGFDO43915 354 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 GPC4O75487 556 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SUPT7LO94864 414 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SNUPNO95149 360 aaKnown RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SIX3O95343 332 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 S100BP04271 92 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 ZNF8P17098 575 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 EEF1DP29692 281 aaKnown RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 TPMTP51580 245 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 DGKEP52429 567 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 ALDH18A1P54886 795 aaKnown RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 AQP5P55064 265 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 CDK3Q00526 305 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 TGFBIQ15582 683 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 PPP1R3AQ16821 1122 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SYTL3Q4VX76 610 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 FRMD7Q6ZUT3 714 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 VRK3Q8IV63 474 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 WDR75Q8IWA0 830 aaKnown RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 ASZ1Q8WWH4 475 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 RMDN2Q96LZ7 410 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SIKE1Q9BRV8 207 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 TRMOQ9BU70 441 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 C1QTNF7Q9BXJ2 289 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SHCBP1LQ9BZQ2 653 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 EML4Q9HC35 981 aaKnown RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 CD93Q9NPY3 652 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 RXFP3Q9NSD7 469 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 UTP6Q9NYH9 597 aaKnown RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 HAO1Q9UJM8 370 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 CDYLQ9Y232 598 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM98Q9Y2Y6 226 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 OARD1Q9Y530 152 aa12.84□□□□□ -0.35
PHGDH-221ENST00000641573 SLC5A10A0PJK1 596 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 TMEM202A6NGA9 273 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 LRRC14BA6NHZ5 514 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 K7ESF4 209 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 FFAR2O15552 330 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 SLCO2B1O94956 709 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 EPN2O95208 641 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 C8GP07360 202 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 PBLDP30039 288 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-221ENST00000641573 MAT2AP31153 395 aaKnown RBP12.83□□□□□ -0.36
PHGDH-221ENST00000641573 RPL14P50914 215 aaKnown RBP12.83□□□□□ -0.36
PHGDH-221ENST00000641573 PPP2CBP62714 309 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 PPP2CAP67775 309 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 DMTNQ08495 405 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 GAS6Q14393 721 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 INPP5AQ14642 412 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 SETDB1Q15047 1291 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 ANKS6Q68DC2 871 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 DOK6Q6PKX4 331 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 NEK10Q6ZWH5 1172 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 RPS27LQ71UM5 84 aaKnown RBP12.83□□□□□ -0.36
PHGDH-221ENST00000641573 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 WDR5BQ86VZ2 330 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 TRAPPC5Q8IUR0 188 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 PGBD3Q8N328 593 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 SKA2Q8WVK7 121 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-221ENST00000641573 ASB12Q8WXK4 309 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 TEX101Q9BY14 249 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 WDR26Q9H7D7 661 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 ITM2CQ9NQX7 267 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 FAM8A1Q9UBU6 413 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 ZDHHC2Q9UIJ5 367 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 GPR34Q9UPC5 381 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 ATG2BQ96BY7 2078 aa12.83□□□□□ -0.36
PHGDH-221ENST00000641573 SETXQ7Z333 2677 aaKnown RBP12.83□□□□□ -0.36
PHGDH-221ENST00000641573 LRRC72A6NJI9 287 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 ZNF195O14628 629 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 SLC16A5O15375 505 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 SLC31A1O15431 190 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 POP7O75817 140 aaKnown RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 RPS17P08708 135 aaKnown RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 GSTM1P09488 218 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 ALOX15P16050 662 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 VCLP18206 1134 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 TSPAN8P19075 237 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 ACSL1P33121 698 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 IGFALSP35858 605 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 TRIM23P36406 574 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 PREPP48147 710 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 AGTR2P50052 363 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 HK2P52789 917 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 CDH13P55290 713 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 NAA20P61599 178 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 GSTM4Q03013 218 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 GALNT1Q10472 559 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-221ENST00000641573 SP140Q13342 867 aa12.82□□□□□ -0.36
PHGDH-221ENST00000641573 PHKG1Q16816 387 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms