RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GSAPA4D1B5 854 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 SOCS6O14544 535 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 MFSD11O43934 449 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 KLHL18O94889 574 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 RARAP10276 462 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 PVRP15151 417 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 INAQ16352 499 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 IFI16Q16666 785 aaKnown RBP17.53■□□□□ 0.4
CLN6-212ENST00000636020 NKAIN1Q4KMZ8 207 aa17.53■□□□□ 0.4
CLN6-212ENST00000636020 DHCR7Q9UBM7 475 aaKnown RBP17.53■□□□□ 0.4
CLN6-212ENST00000636020 OR2B3O76000 313 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 CLDN14O95500 239 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 MST1P26927 711 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 NDUFS1P28331 727 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 PBLDP30039 288 aaPredicted RBP17.52■□□□□ 0.4
CLN6-212ENST00000636020 SMSP52788 366 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 TXNRD3NBQ6F5E7 133 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 KIRREL2Q6UWL6 708 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 BEND7Q8N7W2 519 aaPredicted RBP17.52■□□□□ 0.4
CLN6-212ENST00000636020 ANKRD20A12PQ8NF67 263 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 THOC3Q96J01 351 aaKnown RBP17.52■□□□□ 0.4
CLN6-212ENST00000636020 ZCCHC2Q9C0B9 1178 aaKnown RBP17.52■□□□□ 0.4
CLN6-212ENST00000636020 ENKD1Q9H0I2 346 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 SRMSQ9H3Y6 488 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 FAM60AQ9NP50 221 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 BPIFA1Q9NP55 256 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 SLC22A11Q9NSA0 550 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 HS3ST3B1Q9Y662 390 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 COLEC10Q9Y6Z7 277 aa17.52■□□□□ 0.4
CLN6-212ENST00000636020 OR2AG2A6NM03 316 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 BTN3A3O00478 584 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 BTN3A1O00481 513 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 AURKAO14965 403 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 HCRTR1O43613 425 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 GADD45BO75293 160 aaPredicted RBP17.51■□□□□ 0.39
CLN6-212ENST00000636020 DRD2P14416 443 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 EEF1GP26641 437 aaKnown RBP17.51■□□□□ 0.39
CLN6-212ENST00000636020 ADAMTS18Q8TE60 1221 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 LRRN4Q8WUT4 740 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 NDC1Q9BTX1 674 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 ABI3Q9P2A4 366 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 SEC14L3Q9UDX4 400 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 CDC23Q9UJX2 597 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 ACSL5Q9ULC5 683 aa17.51■□□□□ 0.39
CLN6-212ENST00000636020 GABRA4P48169 554 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 MMRN1Q13201 1228 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 PAFAH1B3Q15102 231 aaKnown RBP17.5■□□□□ 0.39
CLN6-212ENST00000636020 CCDC122Q5T0U0 273 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 PPP1R2P3Q6NXS1 205 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 ACVR1CQ8NER5 493 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 LCN9Q8WX39 176 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 N4BP2L2Q92802 583 aaPredicted RBP17.5■□□□□ 0.39
CLN6-212ENST00000636020 RMDN2Q96LZ7 410 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 NRTNQ99748 197 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 SYT11Q9BT88 431 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 IL26Q9NPH9 171 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 SEMA3GQ9NS98 782 aa17.5■□□□□ 0.39
CLN6-212ENST00000636020 TRAV17A0A0B4J275 112 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 MGAT4DA6NG13 374 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A9O60656 530 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 CTSBP07858 339 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 SLC35G4P0C7Q5 338 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A6P19224 532 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A1P22309 533 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A4P22310 534 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 TNFSF10P50591 281 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 CASP6P55212 293 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 CSNK1G2P78368 415 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 ARG2P78540 354 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 SRSF11Q05519 484 aaKnown RBP17.49■□□□□ 0.39
CLN6-212ENST00000636020 RBPJQ06330 500 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 KRT33BQ14525 404 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 C3AR1Q16581 482 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 TUBB8Q3ZCM7 444 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 LDLRAP1Q5SW96 308 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 NCBP2-AS2Q69YL0 99 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 CNTD1Q8N815 330 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 DDHD1Q8NEL9 900 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 DNAJB8Q8NHS0 232 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 DTX3LQ8TDB6 740 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 TREX2Q9BQ50 279 aaPredicted RBP17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A7Q9HAW7 530 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A10Q9HAW8 530 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 UGT1A8Q9HAW9 530 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 TXLNGQ9NUQ3 528 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 SPO11Q9Y5K1 396 aa17.49■□□□□ 0.39
CLN6-212ENST00000636020 ABCA4P78363 2273 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 FANCGO15287 622 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 ZSCAN9O15535 394 aaPredicted RBP17.48■□□□□ 0.39
CLN6-212ENST00000636020 SLC19A2O60779 497 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 MT-CYBP00156 380 aaPredicted RBP17.48■□□□□ 0.39
CLN6-212ENST00000636020 ESRRAP11474 423 aaPredicted RBP17.48■□□□□ 0.39
CLN6-212ENST00000636020 GSE1Q14687 1217 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 DEFB110Q30KQ9 67 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 FNBP1LQ5T0N5 605 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 FAAH2Q6GMR7 532 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 TGIF2LYQ8IUE0 185 aa17.48■□□□□ 0.39
CLN6-212ENST00000636020 ZNF655Q8N720 491 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms