RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 A0A1W2PNU3 283 aaPredicted RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 A8MU76 341 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 NVLO15381 856 aaKnown RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 ZSCAN12O43309 604 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 CEP104O60308 925 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 CPNE3O75131 537 aaKnown RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 EML2O95834 649 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 FGGP02679 453 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ITIH1P19827 911 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 MSNP26038 577 aaKnown RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 PBLDP30039 288 aaPredicted RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 MC4RP32245 332 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 DRG2P55039 364 aaKnown RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 TMPRSS3P57727 454 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 CXADRP78310 365 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 SQSTM1Q13501 440 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 POU6F1Q14863 301 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 CCNG2Q16589 344 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 SKIDA1Q1XH10 827 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 GPR33Q49SQ1 333 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 KHDC1Q4VXA5 237 aaKnown RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 AGAP9Q5VTM2 703 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 KLHL35Q6PF15 583 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 WDR74Q6RFH5 385 aaPredicted RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 ABRAXAS1Q6UWZ7 409 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 WASH2PQ6VEQ5 465 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ZNF574Q6ZN55 896 aaPredicted RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 CLEC14AQ86T13 490 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 PDZD3Q86UT5 571 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 WFDC3Q8IUB2 231 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 PLXDC1Q8IUK5 500 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 SPACA3Q8IXA5 215 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 RASGEF1AQ8N9B8 481 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 RCBTB1Q8NDN9 531 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 OR13C4Q8NGS5 318 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 USP7Q93009 1102 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.27□□□□□ -1.41
TCF4-249ENST00000625716 SGF29Q96ES7 293 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 FCRL3Q96P31 734 aaPredicted RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 TTC1Q99614 292 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 COPS8Q99627 209 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 C19orf43Q9BQ61 176 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ASPSCR1Q9BZE9 553 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 FAM96AQ9H5X1 160 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 VPS37BQ9H9H4 285 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ASCL3Q9NQ33 180 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 WASH6PQ9NQA3 447 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 POT1Q9NUX5 634 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 SMOXQ9NWM0 555 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 PAK5Q9P286 719 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 FAM8A1Q9UBU6 413 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 KLHL3Q9UH77 587 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 TMPRSS11EQ9UL52 423 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ACSL5Q9ULC5 683 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 PSMD13Q9UNM6 376 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 PCDHGA7Q9Y5G6 932 aa6.27□□□□□ -1.41
TCF4-249ENST00000625716 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.41
TCF4-249ENST00000625716 PRAMEF33A0A0G2JMD5 474 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 HEATR9A2RTY3 570 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 PMS2P1A4D2B8 440 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 A6NCN8 305 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 MGAT4DA6NG13 374 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 LILRA5A6NI73 299 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 OR52A4PA6NMU1 304 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 EFCAB7A8K855 629 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 CDRT15L2A8MXV6 281 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 F8W8V4 182 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 AP3B1O00203 1094 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 GAPDHSO14556 408 aaPredicted RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 GPR39O43194 453 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 LDB2O43679 373 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 PRAMEF10O60809 474 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 UBXN7O94888 489 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 POLBP06746 335 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 SLC35G4P0C7Q5 338 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 THRAP10827 490 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 ATP1B2P14415 290 aaPredicted RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 TYRP1P17643 537 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 CD82P27701 267 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 PPARGP37231 505 aaPredicted RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 ZNF140P52738 457 aaPredicted RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 CTSCP53634 463 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 UBE2IP63279 158 aaKnown RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 CCZ1BP86790 482 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 CCZ1P86791 482 aaPredicted RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 XIAPP98170 497 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 TLE3Q04726 772 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 CACNG1Q06432 222 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 DMPKQ09013 629 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 NFE2L1Q14494 772 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 C16orf72Q14CZ0 275 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 PLCL1Q15111 1095 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 OASLQ15646 514 aaKnown RBP6.26□□□□□ -1.41
TCF4-249ENST00000625716 DCAF12Q5T6F0 453 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 KCTD11Q693B1 232 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 DENND5AQ6IQ26 1287 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 ARMC6Q6NXE6 501 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 CCDC81Q6ZN84 652 aa6.26□□□□□ -1.41
TCF4-249ENST00000625716 TMEM26Q6ZUK4 368 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms