RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 LONP2Q86WA8 852 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 DCP2Q8IU60 420 aaKnown RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TMIEQ8NEW7 156 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 OXNAD1Q96HP4 312 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-229ENST00000622668 APOPT1Q96IL0 206 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 TSSK3Q96PN8 268 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 VN1R3Q9BXE9 311 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 DUSP12Q9UNI6 340 aa8.92□□□□□ -0.98
HDAC9-229ENST00000622668 AQP9O43315 295 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 GMFGO60234 142 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 IPO13O94829 963 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ARHGEF15O94989 841 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 HSD17B2P37059 387 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NFYCQ13952 458 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NR0B2Q15466 257 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 LIPIQ6XZB0 460 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 DTWD2Q8NBA8 298 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 CAMKVQ8NCB2 501 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SP7Q8TDD2 431 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SLC39A13Q96H72 371 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MTERF1Q99551 399 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 PLA2G2FQ9BZM2 168 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ACSS2Q9NR19 701 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 PNO1Q9NRX1 252 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SNX7Q9UNH6 387 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 RNF103-CHMP3A0A140T963 221 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 OR52A4PA6NMU1 304 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SLCO1B7G3V0H7 640 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NDUFS4O43181 175 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 B3GALT2O43825 422 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MPLP40238 635 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 AQP5P55064 265 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 VSX2P58304 361 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MSLNQ13421 630 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 DPYSQ14117 519 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NFE2L1Q14494 772 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MUM1Q2TAK8 710 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 DUPD1Q68J44 220 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 C16orf62Q7Z3J2 963 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 WFDC5Q8TCV5 224 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 WBP2Q969T9 261 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 EXOSC8Q96B26 276 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MMABQ96EY8 250 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 TMEM30AQ9NV96 361 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 IFT80Q9P2H3 777 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 CLEC4EQ9ULY5 219 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 DGKBQ9Y6T7 804 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ERI3O43414 337 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NOL3O60936 208 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 OTX2P32243 289 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 CCR8P51685 355 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MAPK12P53778 367 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ARF5P84085 180 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 IRF4Q15306 451 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 C1orf189Q5VU69 101 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 TRAF7Q6Q0C0 670 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SPATA21Q7Z572 469 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 PLD3Q8IV08 490 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SCML4Q8N228 414 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 PLEKHA8Q96JA3 519 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 CNDP2Q96KP4 475 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MRGPRX1Q96LB2 322 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MKRN2Q9H000 416 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 RERGLQ9H628 205 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 LRRC4CQ9HCJ2 640 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 EIF2B3Q9NR50 452 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MYO18AQ92614 2054 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 TET1Q8NFU7 2136 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 TIMP2P16035 220 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 HMGCLP35914 325 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 GRK6P43250 576 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SLC1A6P48664 564 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 FGL2Q14314 439 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 TMEM196Q5HYL7 178 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 PPM1JQ5JR12 505 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ZDHHC14Q8IZN3 488 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 IL17RCQ8NAC3 791 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SLC13A3Q8WWT9 602 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 FAM120BQ96EK7 910 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 SMOC1Q9H4F8 434 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NOL11Q9H8H0 719 aaKnown RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 MRGBPQ9NV56 204 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 NDE1Q9NXR1 346 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ATP6V1HQ9UI12 483 aa8.91□□□□□ -0.98
HDAC9-229ENST00000622668 HEMK1Q9Y5R4 338 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-229ENST00000622668 ZNF860A6NHJ4 632 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 DRGXA6NNA5 263 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 TNFRSF10AO00220 468 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SAP18O00422 153 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SCN2BO60939 215 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 HGFP14210 728 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 MANFP55145 182 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 SLC10A2Q12908 348 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 STX5Q13190 355 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 C3orf38Q5JPI3 329 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 AGBL2Q5U5Z8 902 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 ICE2Q659A1 982 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 ZCCHC8Q6NZY4 707 aaKnown RBP8.9□□□□□ -0.98
HDAC9-229ENST00000622668 MCEMP1Q8IX19 187 aa8.9□□□□□ -0.98
HDAC9-229ENST00000622668 DENND1AQ8TEH3 1009 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms