RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ADAM7Q9H2U9 754 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 C11orf16Q9NQ32 467 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 SDHAF3Q9NRP4 125 aa11.01□□□□□ -0.65
CCDC144B-208ENST00000618081 PEAK1Q9H792 1746 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 FAM234BA2RU67 622 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ZBTB22O15209 634 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ALPPP05187 535 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ELNP15502 786 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CDH13P55290 713 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 GHRHRQ02643 423 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PUM1Q14671 1186 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC144B-208ENST00000618081 UBAP2Q5T6F2 1119 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 MPP5Q8N3R9 675 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 MREGQ8N565 214 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 NUS1Q96E22 293 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CLPTM1LQ96KA5 538 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 SCGB3A2Q96PL1 93 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 KCTD15Q96SI1 283 aaPredicted RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 AGAP2Q99490 1192 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ANKHQ9HCJ1 492 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 C12orf4Q9NQ89 552 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 RAB26Q9ULW5 256 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 NDUFS1P28331 727 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PTGER3P43115 390 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CYP4F8P98187 520 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC1A5Q15758 541 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PHF19Q5T6S3 580 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 C15orf52Q6ZUT6 534 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 SERPINA9Q86WD7 417 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 SDR16C5Q8N3Y7 309 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 FSTL5Q8N475 847 aaPredicted RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 OR52J3Q8NH60 311 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC35G5Q96KT7 338 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 DPYSL5Q9BPU6 564 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 HYKKA2RU49 373 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 IQCF5A8MTL0 148 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 TREHO43280 583 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 AKAP8O43823 692 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 HSPA7P48741 367 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 RFTN1Q14699 578 aaPredicted RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 GXYLT1Q4G148 440 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 GK5Q6ZS86 529 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 RALGPS2Q86X27 583 aaPredicted RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 RAB43Q86YS6 212 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 WFIKKN2Q8TEU8 576 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 HMCESQ96FZ2 354 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PRORSD1PA6NEY8 169 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 RLN2P04090 185 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 GJB1P08034 283 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ENPP2Q13822 863 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CAND1Q86VP6 1230 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 B3GALT6Q96L58 329 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 TRBV23OR9-2A0A075B6M9 112 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ELOA3DA6NLF2 546 aaPredicted RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 KCNU1A8MYU2 1149 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PEX12O00623 359 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 SEPT4O43236 478 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CPNE3O75131 537 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 PRPS2P11908 318 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 MMP8P22894 467 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PRKD1Q15139 912 aaPredicted RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 ELOA3BQ3SY89 546 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 ZNF613Q6PF04 617 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 LINGO4Q6UY18 593 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PRELID2Q8N945 189 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 TSTD1Q8NFU3 115 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ELOA3Q8NG57 546 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 TMEM125Q96AQ2 219 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ROPN1LQ96C74 230 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 DUXAA6NLW8 204 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 GPIP06744 558 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 MAT2AP31153 395 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 OR3A3P47888 321 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 OR3A2P47893 321 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 GDI2P50395 445 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC8B1Q6J4K2 584 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 KCNK18Q7Z418 384 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CMC1Q7Z7K0 106 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CNTD1Q8N815 330 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 TSEN2Q8NCE0 465 aaKnown RBP11□□□□□ -0.65
CCDC144B-208ENST00000618081 SLC44A1Q8WWI5 657 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 C12orf66Q96MD2 445 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 EBPLQ9BY08 206 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 PCDHGB2Q9Y5G2 931 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 FADS3Q9Y5Q0 445 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 FKBP7Q9Y680 259 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ALOX15BO15296 676 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 IL10RBQ08334 325 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 TTMPQ5BVD1 217 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 IL23RQ5VWK5 629 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 IFNL1Q8IU54 200 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 CPNE9Q8IYJ1 553 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 ATG10Q9H0Y0 220 aa11□□□□□ -0.65
CCDC144B-208ENST00000618081 A0A0J9YVX5 310 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 TNFRSF10BO14763 440 aa10.99□□□□□ -0.65
CCDC144B-208ENST00000618081 PLSCR1O15162 318 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms