RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 CCT6BQ92526 530 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 MAGEB10Q96LZ2 347 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 SORT1Q99523 831 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 SLC30A3Q99726 388 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 C1QTNF3Q9BXJ4 246 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 WDR26Q9H7D7 661 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 SAR1AQ9NR31 198 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 WWOXQ9NZC7 414 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 GALPQ9UBC7 116 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 CDYLQ9Y232 598 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PLXNA2O75051 1894 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 NEMP2A6NFY4 417 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 OR2AG2A6NM03 316 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 AXIN1O15169 862 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 KCNJ13O60928 360 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 RNGTTO60942 597 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 KATNA1O75449 491 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PCCBP05166 539 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 KELP23276 732 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PKNOX1P55347 436 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 LACTB2Q53H82 288 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 FOXR1Q6PIV2 292 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 UBE2R2Q712K3 238 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 CUZD1Q86UP6 607 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 HORMAD1Q86X24 394 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PGBD3Q8N328 593 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 RASGEF1AQ8N9B8 481 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PDPRQ8NCN5 879 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 EZH1Q92800 747 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 ATP6V1E2Q96A05 226 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 CCT7Q99832 543 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 CCDC28BQ9BUN5 200 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 BTBD1Q9H0C5 482 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 RMI1Q9H9A7 625 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 COG4Q9H9E3 785 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PARVBQ9HBI1 364 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 SGK2Q9HBY8 427 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 PNPOQ9NVS9 261 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 TMPRSS11EQ9UL52 423 aa16.45■□□□□ 0.22
TRAPPC3-210ENST00000617904 SDK1Q7Z5N4 2213 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 EML5Q05BV3 1969 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 A0A1W2PQF6 199 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 NCF1BA6NI72 391 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 NCF1CA8MVU1 366 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 CACNB4O00305 520 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 MATN2O00339 956 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 HGSO14964 777 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 FOXD2O60548 495 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 ADAM23O75077 832 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 MTX2O75431 263 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 RPN2P04844 631 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 ADRB1P08588 477 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 NCF1P14598 390 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 OXTRP30559 389 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 ARL1P40616 181 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 IRX1P78414 480 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 CLCQ05315 142 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 RPA4Q13156 261 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 PCBP2Q15366 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 RBBP7Q16576 425 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 KIAA1211LQ6NV74 962 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 MTDHQ86UE4 582 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 CAMKK1Q8N5S9 505 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 HM13Q8TCT9 377 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 LKAAEAR1Q8TD35 194 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 FAM131CQ96AQ9 280 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 ERP27Q96DN0 273 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 LOXL4Q96JB6 756 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 LINC00615Q96LM1 132 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 HGH1Q9BTY7 390 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 C1QTNF2Q9BXJ5 285 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 SLC12A9Q9BXP2 914 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 SLC17A9Q9BYT1 436 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 C20orf27Q9GZN8 174 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 MKRN2Q9H000 416 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 OR2AG1Q9H205 316 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 ARRDC1-AS1Q9H2J1 176 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 ARL15Q9NXU5 204 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 OPTCQ9UBM4 332 aa16.44■□□□□ 0.22
TRAPPC3-210ENST00000617904 SPAG17Q6Q759 2223 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 A0A1W2PQU0 124 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 TCRBV21S2A2A0A5A6 115 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 H3BM21 787 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 VPS4BO75351 444 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 SLCO2B1O94956 709 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 EPN2O95208 641 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 OTCP00480 354 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 SERPINA6P08185 405 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 MTHFD2P13995 350 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 GM2AP17900 193 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 MPSTP25325 297 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 NUDT1P36639 197 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 RPIAP49247 311 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 MNAT1P51948 309 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 ADPRHP54922 357 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 SF3A2Q15428 464 aaKnown RBP16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 UNC50Q53HI1 259 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 EPGNQ6UW88 154 aa16.43■□□□□ 0.22
TRAPPC3-210ENST00000617904 ADGRG6Q86SQ4 1221 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms