RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 CLCQ05315 142 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 SPCS2Q15005 226 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 FAM151BQ6UXP7 276 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 TMEM199Q8N511 208 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 KREMEN2Q8NCW0 462 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 ESAMQ96AP7 390 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 KCNA7Q96RP8 456 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 DGCR6LQ9BY27 220 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 MROQ9BYG7 248 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 FBRSL1Q9HCM7 1045 aaKnown RBP16.21■□□□□ 0.18
CNOT3-208ENST00000613073 DNMT3BQ9UBC3 853 aaKnown RBP16.21■□□□□ 0.18
CNOT3-208ENST00000613073 A0A1B0GTL3 188 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 LEFTY2O00292 366 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 SNAP29O95721 258 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 BMP2P12643 396 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 CCR2P41597 374 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 STK19P49842 368 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 PIGFQ07326 219 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 SELENBP1Q13228 472 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 LRP8Q14114 963 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 CLPPQ16740 277 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 RAB44Q7Z6P3 723 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 OR2T34Q8NGX1 318 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 OR2T3Q8NH03 318 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 STAG3L4Q8TBR4 150 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 EEF1AKMT1Q8WVE0 214 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 PIH1D2Q8WWB5 315 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 C3orf30Q96M34 536 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 LHPPQ9H008 270 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 TFB2MQ9H5Q4 396 aaKnown RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 MEAF6Q9HAF1 191 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 IL17CQ9P0M4 197 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 TRAV19A0A0A6YYK7 116 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 HIDE1A8MVS5 230 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 E5RI56 91 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 GPC4O75487 556 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 ECI2O75521 394 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 CDK14O94921 469 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 PGLSO95336 258 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 ERVFC1P60507 584 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 NFKB2Q00653 900 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 BCL2L1Q07817 233 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 CAMK2BQ13554 666 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 CYHR1Q6ZMK1 362 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 HTR3DQ70Z44 454 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 OR13F1Q8NGS4 319 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 RHEBL1Q8TAI7 183 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 KIAA1191Q96A73 305 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 SH3YL1Q96HL8 342 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 UHRF1Q96T88 793 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 TCF25Q9BQ70 676 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 SEMA4BQ9NPR2 832 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 SCHIP1Q9P0W5 487 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 GIMAP2Q9UG22 337 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 INTS6Q9UL03 887 aaKnown RBP16.2■□□□□ 0.18
CNOT3-208ENST00000613073 ERVK-11Q9UQG0 969 aa16.2■□□□□ 0.18
CNOT3-208ENST00000613073 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 LCHNA4D1U4 455 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 CLDN25C9JDP6 229 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 UBDO15205 165 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 SYNCRIPO60506 623 aaKnown RBP16.19■□□□□ 0.18
CNOT3-208ENST00000613073 XYLBO75191 536 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 VPS26AO75436 327 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 CA5AP35218 305 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 FAM217AQ8IXS0 508 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 PELI3Q8N2H9 469 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 FBXO39Q8N4B4 442 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 DHRSXQ8N5I4 330 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 FAR2Q96K12 515 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 CGREF1Q99674 301 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 DERL2Q9GZP9 239 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 ADNPQ9H2P0 1102 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 UTP6Q9NYH9 597 aaKnown RBP16.19■□□□□ 0.18
CNOT3-208ENST00000613073 TRMT6Q9UJA5 497 aaKnown RBP16.19■□□□□ 0.18
CNOT3-208ENST00000613073 PSME2Q9UL46 239 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 A0A1W2PQ67 120 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 DHRS12A0PJE2 317 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 KERAO60938 352 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 LINC00271P0C7V0 271 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 ITGB6P18564 788 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 AGTR2P50052 363 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 AQP6Q13520 282 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 DGKKQ5KSL6 1271 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 LILRA6Q6PI73 481 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 IFNEQ86WN2 208 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 MFSD2AQ8NA29 543 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 TERB1Q8NA31 727 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 FUBP1Q96AE4 644 aaKnown RBP16.19■□□□□ 0.18
CNOT3-208ENST00000613073 TCEAL4Q96EI5 215 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 LINGO1Q96FE5 620 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 CTRCQ99895 268 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 TRMOQ9BU70 441 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 ABCB8Q9NUT2 735 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 PKD2L2Q9NZM6 624 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 CXXC1Q9P0U4 656 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-208ENST00000613073 DNAJC15Q9Y5T4 150 aa16.19■□□□□ 0.18
CNOT3-208ENST00000613073 OAS3Q9Y6K5 1087 aaKnown RBP16.19■□□□□ 0.18
CNOT3-208ENST00000613073 MAN1A2O60476 641 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 RFPL2O75678 378 aa16.18■□□□□ 0.18
CNOT3-208ENST00000613073 CLDN7O95471 211 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms