RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TMCO3Q6UWJ1 677 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 OLIG1Q8TAK6 271 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 RNF128Q8TEB7 428 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 SUSD6Q92537 303 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 SGK494Q96LW2 274 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 OR6C1Q96RD1 312 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 C16orf70Q9BSU1 422 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 SYNCQ9H7C4 482 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 ERVMER34-1Q9H9K5 563 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 A4GALTQ9NPC4 353 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 INTS9Q9NV88 658 aaKnown RBP3.91□□□□□ -1.78
HDDC2-207ENST00000608532 OSER1Q9NX31 292 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 ARHGEF38Q9NXL2 777 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 LARSQ9P2J5 1176 aaKnown RBP3.91□□□□□ -1.78
HDDC2-207ENST00000608532 ZNF215Q9UL58 517 aaPredicted RBP3.91□□□□□ -1.78
HDDC2-207ENST00000608532 EXOGQ9Y2C4 368 aaKnown RBP3.91□□□□□ -1.78
HDDC2-207ENST00000608532 MMP24Q9Y5R2 645 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 PRSS21Q9Y6M0 314 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 RNF215Q9Y6U7 377 aa3.91□□□□□ -1.78
HDDC2-207ENST00000608532 A0A087WW49 117 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 CTDSP2O14595 271 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 TCERG1O14776 1098 aaKnown RBP3.9□□□□□ -1.79
HDDC2-207ENST00000608532 ATP6V0E1O15342 81 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 ZBED4O75132 1171 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 CRLF1O75462 422 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 BAIAP3O94812 1187 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 PIGNO95427 931 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 RAF1P04049 648 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 VPREB1P12018 145 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 GABRA5P31644 462 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 SLC15A1P46059 708 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 SLC6A12P48065 614 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 CX3CL1P78423 397 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 AIMP2Q13155 320 aaKnown RBP3.9□□□□□ -1.79
HDDC2-207ENST00000608532 TAF13Q15543 124 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 KRT71Q3SY84 523 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 MDH1BQ5I0G3 518 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 Q6ZSR9 355 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 HAUS6Q7Z4H7 955 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 SCML4Q8N228 414 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 MAPK1IP1LQ8NDC0 245 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 OR2AJ1Q8NGZ0 328 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 LRRC59Q96AG4 307 aaKnown RBP3.9□□□□□ -1.79
HDDC2-207ENST00000608532 MAGED4Q96JG8 741 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 POM121L2Q96KW2 1035 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 TIGD1Q96MW7 591 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 CHCHD6Q9BRQ6 235 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 ZDHHC18Q9NUE0 388 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 BARHL2Q9NY43 387 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 FLRT3Q9NZU0 649 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 PLAGL1Q9UM63 463 aa3.9□□□□□ -1.79
HDDC2-207ENST00000608532 LAS1LQ9Y4W2 734 aaKnown RBP3.9□□□□□ -1.79
HDDC2-207ENST00000608532 NOTCH3Q9UM47 2321 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 A0A0J9YWU9 116 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 LNP1A1A4G5 178 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 HYKKA2RU49 373 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 XRCC3O43542 346 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 DOK2O60496 412 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 PRKRAO75569 313 aaKnown RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 SORBS2O94875 1100 aaKnown RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 AP2A2O94973 939 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 FAM157CP0CG43 387 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 DPEP1P16444 411 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 PPARDQ03181 441 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 PNRC1Q12796 327 aaPredicted RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 SLC1A5Q15758 541 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 GRTP1Q5TC63 336 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 LDB1Q86U70 411 aaPredicted RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 COMMD2Q86X83 199 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 CFAP206Q8IYR0 622 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 C17orf53Q8N3J3 647 aaPredicted RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 FBXO39Q8N4B4 442 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 ZNF611Q8N823 705 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 OR5M8Q8NGP6 311 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 GRHL3Q8TE85 626 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 ZNF689Q96CS4 500 aaPredicted RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 ATOH8Q96SQ7 321 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 IWS1Q96ST2 819 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 TRIM15Q9C019 465 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 VN1R1Q9GZP7 353 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 S1PR5Q9H228 398 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 PPIL3Q9H2H8 161 aaKnown RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 KCNK15Q9H427 330 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 SEC63Q9UGP8 760 aaKnown RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 OSGIN1Q9UJX0 560 aa3.89□□□□□ -1.79
HDDC2-207ENST00000608532 ZHX1Q9UKY1 873 aaPredicted RBP3.89□□□□□ -1.79
HDDC2-207ENST00000608532 LOC101059948A0A1B0GTJ6 334 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 PRR32B1ATL7 298 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 SLCO1B7G3V0H7 640 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 GAPDHSO14556 408 aaPredicted RBP3.88□□□□□ -1.79
HDDC2-207ENST00000608532 GJA1P17302 382 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 EFNA1P20827 205 aaPredicted RBP3.88□□□□□ -1.79
HDDC2-207ENST00000608532 GCH1P30793 250 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 PSMB10P40306 273 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 PDX1P52945 283 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 TPD52P55327 224 aaPredicted RBP3.88□□□□□ -1.79
HDDC2-207ENST00000608532 MC1RQ01726 317 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 IGSF11Q5DX21 431 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 RAB41Q5JT25 222 aa3.88□□□□□ -1.79
HDDC2-207ENST00000608532 FIGLAQ6QHK4 219 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms