RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CHUKO15111 745 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 KLHL41O60662 606 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 FSBPO95073 299 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 MAPK9P45984 424 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 PREPP48147 710 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 PLOD1Q02809 727 aaPredicted RBP21.12■□□□□ 0.97
USP6NL-204ENST00000606752 RBBP7Q16576 425 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 KANK2Q63ZY3 851 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 TTC23LQ6PF05 361 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 GOLGA7Q7Z5G4 137 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 CFAP206Q8IYR0 622 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 DEFB123Q8N688 67 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 ZNF382Q96SR6 550 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 TMEM79Q9BSE2 394 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 WDR26Q9H7D7 661 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 DNAJC15Q9Y5T4 150 aa21.12■□□□□ 0.97
USP6NL-204ENST00000606752 PSIP1O75475 530 aaKnown RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 PKNOX1P55347 436 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 AP1S2P56377 157 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 ABRQ12979 859 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 GTF2H2Q13888 395 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 UBAP2LQ14157 1087 aaKnown RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 GTF2H2CQ6P1K8 395 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 SYVN1Q86TM6 617 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 FAM124AQ86V42 546 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 TCAIMQ8N3R3 496 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 OR2L2Q8NH16 312 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 CEP70Q8NHQ1 597 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 ASB12Q8WXK4 309 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 NOL11Q9H8H0 719 aaKnown RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 A0A1B0GTL3 188 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 MGAT4DA6NG13 374 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 H3BM21 787 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 HNRNPCL1O60812 293 aaKnown RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 DNAJC8O75937 253 aaPredicted RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 CHRNB1P11230 501 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 GABRG2P18507 467 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 GGT5P36269 586 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 HNMTP50135 292 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 CCR3P51677 355 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 FOXA1P55317 472 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 PRPF38BQ5VTL8 546 aaKnown RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 NXNQ6DKJ4 435 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 CRTC3Q6UUV7 619 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 MBOAT1Q6ZNC8 495 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 GPRIN3Q6ZVF9 776 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 TREML1Q86YW5 311 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 TEX9Q8N6V9 391 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 ACTRT2Q8TDY3 377 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 PHPT1Q9NRX4 125 aaPredicted RBP21.11■□□□□ 0.97
USP6NL-204ENST00000606752 OPTCQ9UBM4 332 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 ZNF225Q9UK10 706 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 STK38LQ9Y2H1 464 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 OR1A2Q9Y585 309 aa21.11■□□□□ 0.97
USP6NL-204ENST00000606752 PRR5-ARHGAP8B1AHC4 643 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 GPR89AB7ZAQ6 455 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 CCNT2O60583 730 aaKnown RBP21.1■□□□□ 0.97
USP6NL-204ENST00000606752 CRCPO75575 148 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 STK16O75716 305 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 GPR89BP0CG08 455 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 AOC1P19801 751 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 PDHA2P29803 388 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 PRDX3P30048 256 aaKnown RBP21.1■□□□□ 0.97
USP6NL-204ENST00000606752 GDF5P43026 501 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 RASSF2P50749 326 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 TPMTP51580 245 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 ARHGAP8P85298 464 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 PRKCQQ04759 706 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 DOK6Q6PKX4 331 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 C11orf96Q7Z7L8 435 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 HM13Q8TCT9 377 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 PTCD3Q96EY7 689 aaKnown RBP21.1■□□□□ 0.97
USP6NL-204ENST00000606752 FOPNLQ96NB1 174 aa21.1■□□□□ 0.97
USP6NL-204ENST00000606752 DNMT3AQ9Y6K1 912 aaPredicted RBP21.1■□□□□ 0.97
USP6NL-204ENST00000606752 K7EPI3 171 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 CALB2P22676 271 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 MAP4P27816 1152 aaKnown RBP21.09■□□□□ 0.97
USP6NL-204ENST00000606752 MAT2AP31153 395 aaKnown RBP21.09■□□□□ 0.97
USP6NL-204ENST00000606752 OR52B6Q8NGF0 335 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 CFAP61Q8NHU2 1237 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 TWIST2Q8WVJ9 160 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 KLHL29Q96CT2 875 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 KCNA7Q96RP8 456 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 IPPKQ9H8X2 491 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 POLMQ9NP87 494 aaPredicted RBP21.09■□□□□ 0.97
USP6NL-204ENST00000606752 LNPEPQ9UIQ6 1025 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 CA14Q9ULX7 337 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 ANGPTL3Q9Y5C1 460 aa21.09■□□□□ 0.97
USP6NL-204ENST00000606752 OR7A17O14581 309 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 OTCP00480 354 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 CATP04040 527 aaKnown RBP21.08■□□□□ 0.97
USP6NL-204ENST00000606752 UROSP10746 265 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 ESRRAP11474 423 aaPredicted RBP21.08■□□□□ 0.97
USP6NL-204ENST00000606752 PPP2CBP62714 309 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 PPP2CAP67775 309 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 TFF2Q03403 129 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 NUMA1Q14980 2115 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 Q6ZS52 159 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 ASRGL1Q7L266 308 aa21.08■□□□□ 0.97
USP6NL-204ENST00000606752 EFL1Q7Z2Z2 1120 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms