RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 MMP13P45452 471 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 PTP4A2Q12974 167 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 XRCC4Q13426 336 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 NKG7Q16617 165 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 DEFB110Q30KQ9 67 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 ISM2Q6H9L7 571 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 SHISA6Q6ZSJ9 500 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 CAMKMTQ7Z624 323 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 BBS5Q8N3I7 341 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 TRAM1L1Q8N609 369 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 SIRT6Q8N6T7 355 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 ACRBPQ8NEB7 543 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 SLC20A1Q8WUM9 679 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 RMND5BQ96G75 393 aaPredicted RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 NRTNQ99748 197 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 ZSCAN5AQ9BUG6 496 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 TDRD1Q9BXT4 1180 aaKnown RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 DHX35Q9H5Z1 703 aaKnown RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 KIR3DX1Q9H7L2 352 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 ZNF395Q9H8N7 513 aaPredicted RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 ZNF160Q9HCG1 818 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 NT5MQ9NPB1 228 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 TMPRSS11EQ9UL52 423 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 AP4E1Q9UPM8 1137 aa13.79□□□□□ -0.2
TRIM11-205ENST00000602308 MRPS2Q9Y399 296 aaKnown RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 HRNRQ86YZ3 2850 aaPredicted RBP13.79□□□□□ -0.2
TRIM11-205ENST00000602308 CUBNO60494 3623 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 FAM227AF5H4B4 570 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 PRAMEF1O95521 474 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 CYP1A1P04798 512 aaPredicted RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 GABRA4P48169 554 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 ZNF143P52747 638 aaPredicted RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 CTSCP53634 463 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 STIM1Q13586 685 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 NFE2L1Q14494 772 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 RBBP7Q16576 425 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 MARC1Q5VT66 337 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 DPY19L2P1Q6NXN4 242 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 AMZ2Q86W34 360 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 CHERPQ8IWX8 916 aaKnown RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 MARVELD2Q8N4S9 558 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 TAB3Q8N5C8 712 aaPredicted RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 ZNF655Q8N720 491 aaPredicted RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 LPCAT1Q8NF37 534 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 LILRB4Q8NHJ6 448 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 CCHCR1Q8TD31 782 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 GPATCH1Q9BRR8 931 aaKnown RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 SELENOOQ9BVL4 669 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 SOX17Q9H6I2 414 aaPredicted RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 MRM3Q9HC36 420 aaKnown RBP13.78□□□□□ -0.2
TRIM11-205ENST00000602308 TXLNGQ9NUQ3 528 aa13.78□□□□□ -0.2
TRIM11-205ENST00000602308 BTN3A3O00478 584 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 ZSCAN9O15535 394 aaPredicted RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 MAP3K7O43318 606 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 KCNJ13O60928 360 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 USP1O94782 785 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 HPP00738 406 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 ABOP16442 354 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 TMEM115Q12893 351 aaPredicted RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 OLIG2Q13516 323 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 DEFB113Q30KQ7 82 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 CEP128Q6ZU80 1094 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 OVCH1Q7RTY7 1134 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 KBTBD2Q8IY47 623 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 SPDYE1Q8NFV5 336 aaPredicted RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 CCDC110Q8TBZ0 833 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 N4BP2L2Q92802 583 aaPredicted RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 C12orf66Q96MD2 445 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 CLEC4MQ9H2X3 399 aaPredicted RBP13.77□□□□□ -0.21
TRIM11-205ENST00000602308 WDR54Q9H977 334 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 ZFYVE1Q9HBF4 777 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 IL17CQ9P0M4 197 aa13.77□□□□□ -0.21
TRIM11-205ENST00000602308 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 GTPBP10A4D1E9 387 aaKnown RBP13.76□□□□□ -0.21
TRIM11-205ENST00000602308 NPIPA5E9PKD4 350 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 MATN2O00339 956 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 PRR35P0CG20 571 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 GSCP56915 257 aaPredicted RBP13.76□□□□□ -0.21
TRIM11-205ENST00000602308 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
TRIM11-205ENST00000602308 HSF1Q00613 529 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 DSC2Q02487 901 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 ITKQ08881 620 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 PKP1Q13835 747 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 QPCTQ16769 361 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 PDPK2PQ6A1A2 396 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 CHSY3Q70JA7 882 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 COX15Q7KZN9 410 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 FKBP10Q96AY3 582 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 WWP1Q9H0M0 922 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 VPS16Q9H269 839 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 DEF6Q9H4E7 631 aa13.76□□□□□ -0.21
TRIM11-205ENST00000602308 KCNJ16Q9NPI9 418 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms