RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FOXK2Q01167 660 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ABRQ12979 859 aa14□□□□□ -0.17
LIG1-208ENST00000595758 PLCL1Q15111 1095 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ISXQ2M1V0 245 aa14□□□□□ -0.17
LIG1-208ENST00000595758 MAP9Q49MG5 647 aa14□□□□□ -0.17
LIG1-208ENST00000595758 CCNI2Q6ZMN8 369 aaPredicted RBP14□□□□□ -0.17
LIG1-208ENST00000595758 STRA8Q7Z7C7 330 aa14□□□□□ -0.17
LIG1-208ENST00000595758 SLC26A11Q86WA9 606 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ZBTB2Q8N680 514 aa14□□□□□ -0.17
LIG1-208ENST00000595758 NCSTNQ92542 709 aa14□□□□□ -0.17
LIG1-208ENST00000595758 CDKL2Q92772 493 aa14□□□□□ -0.17
LIG1-208ENST00000595758 NDNQ99608 321 aa14□□□□□ -0.17
LIG1-208ENST00000595758 DPYSL5Q9BPU6 564 aa14□□□□□ -0.17
LIG1-208ENST00000595758 NUDT22Q9BRQ3 303 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ZMYND15Q9H091 742 aa14□□□□□ -0.17
LIG1-208ENST00000595758 KIR3DX1Q9H7L2 352 aa14□□□□□ -0.17
LIG1-208ENST00000595758 LATS2Q9NRM7 1088 aa14□□□□□ -0.17
LIG1-208ENST00000595758 NSMCE4AQ9NXX6 385 aa14□□□□□ -0.17
LIG1-208ENST00000595758 KLHL42Q9P2K6 505 aa14□□□□□ -0.17
LIG1-208ENST00000595758 GALPQ9UBC7 116 aa14□□□□□ -0.17
LIG1-208ENST00000595758 SLC24A2Q9UI40 661 aa14□□□□□ -0.17
LIG1-208ENST00000595758 NFU1Q9UMS0 254 aa14□□□□□ -0.17
LIG1-208ENST00000595758 ASF1AQ9Y294 204 aa14□□□□□ -0.17
LIG1-208ENST00000595758 MED16Q9Y2X0 877 aa14□□□□□ -0.17
LIG1-208ENST00000595758 PSAT1Q9Y617 370 aa14□□□□□ -0.17
LIG1-208ENST00000595758 CEP295Q9C0D2 2601 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 TMX2-CTNND1H3BSU7 103 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 VPS26AO75436 327 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 PIAS1O75925 651 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 UBXN7O94888 489 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 PROS1P07225 676 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 CFHR1Q03591 330 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 KYNUQ16719 465 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 TTLL9Q3SXZ7 439 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 WDR74Q6RFH5 385 aaPredicted RBP13.99□□□□□ -0.17
LIG1-208ENST00000595758 RELL1Q8IUW5 271 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 SIDT2Q8NBJ9 832 aaKnown RBP13.99□□□□□ -0.17
LIG1-208ENST00000595758 ACVR1CQ8NER5 493 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 CFAP61Q8NHU2 1237 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 SKA2Q8WVK7 121 aaPredicted RBP13.99□□□□□ -0.17
LIG1-208ENST00000595758 JPH3Q8WXH2 748 aaPredicted RBP13.99□□□□□ -0.17
LIG1-208ENST00000595758 INPP5DQ92835 1189 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 GRAMD1AQ96CP6 724 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 TMEM74Q96NL1 305 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 GPR21Q99679 349 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
LIG1-208ENST00000595758 SMYD2Q9NRG4 433 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 CORO1CQ9ULV4 474 aaPredicted RBP13.99□□□□□ -0.17
LIG1-208ENST00000595758 DHRS7Q9Y394 339 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 MSRB2Q9Y3D2 182 aa13.99□□□□□ -0.17
LIG1-208ENST00000595758 PTPRBP23467 1997 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 FAM159BA6NKW6 160 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 CXorf49A8MYA2 514 aaPredicted RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 SLU7O95391 586 aaKnown RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 HOXB3P14651 431 aaPredicted RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 ATP5DP30049 168 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 STX2P32856 288 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 CSF2RBP32927 897 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 SKIV2L2P42285 1042 aaKnown RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 PDX1P52945 283 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 INHBCP55103 352 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 TUBB4BP68371 445 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 ZFP36L1Q07352 338 aaKnown RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 PRKG2Q13237 762 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 GBX1Q14549 363 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 ACSBG2Q5FVE4 666 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 RBM20Q5T481 1227 aaKnown RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 UGT3A1Q6NUS8 523 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 TMEM71Q6P5X7 295 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 KLHL35Q6PF15 583 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 UNC5DQ6UXZ4 953 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 ZNF574Q6ZN55 896 aaPredicted RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 TMPRSS9Q7Z410 1059 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 B3GNT8Q7Z7M8 397 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 ZC3HC1Q86WB0 502 aaKnown RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 CTAGE3PQ8IX95 158 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 TBC1D21Q8IYX1 336 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 GPATCH11Q8N954 259 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 OR4D9Q8NGE8 314 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 OR5AR1Q8NGP9 310 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 GIMAP7Q8NHV1 300 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 FBF1Q8TES7 1133 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 LCN9Q8WX39 176 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 ATXN7L3BQ96GX2 97 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 SLC30A3Q99726 388 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 SEMA6CQ9H3T2 930 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 NINJ2Q9NZG7 142 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 OGFRQ9NZT2 677 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 TXNDC16Q9P2K2 825 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 POLG2Q9UHN1 485 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 TRMT6Q9UJA5 497 aaKnown RBP13.98□□□□□ -0.17
LIG1-208ENST00000595758 VWA7Q9Y334 891 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 ENTPD2Q9Y5L3 495 aa13.98□□□□□ -0.17
LIG1-208ENST00000595758 RPN2P04844 631 aa13.97□□□□□ -0.17
LIG1-208ENST00000595758 MPSTP25325 297 aa13.97□□□□□ -0.17
LIG1-208ENST00000595758 PHBP35232 272 aa13.97□□□□□ -0.17
LIG1-208ENST00000595758 CDKN2DP55273 166 aa13.97□□□□□ -0.17
LIG1-208ENST00000595758 TIAL1Q01085 375 aaKnown RBP eCLIP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms