RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 POP7O75817 140 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 VCLP18206 1134 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 CYLC1P35663 651 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 HADHAP40939 763 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 MAGEA1P43355 309 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 LMAN1P49257 510 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 RPL26P61254 145 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 GBE1Q04446 702 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 TMEM115Q12893 351 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 ARMC6Q6NXE6 501 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 OOSP2Q86WS3 158 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 TRAM1L1Q8N609 369 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 RNF157Q96PX1 679 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 INSM2Q96T92 566 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 NRTNQ99748 197 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 FANCEQ9HB96 536 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 ZFYVE1Q9HBF4 777 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 OLAHQ9NV23 265 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 SERTAD3Q9UJW9 196 aa13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 RPL26L1Q9UNX3 145 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 ZNF469Q96JG9 3925 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-208ENST00000595726 SOWAHDA6NJG2 315 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 CCL21O00585 134 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 MMP2P08253 660 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 MTHFD1P11586 935 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 AGXTP21549 392 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 CDH3P22223 829 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 FOLR3P41439 243 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 SLC1A1P43005 524 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 OTUD4Q01804 1114 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 ADCY2Q08462 1091 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 NFE2L1Q14494 772 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 LRRC38Q5VT99 294 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 ALG1LQ6GMV1 187 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 TIGD7Q6NT04 549 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 FAM180AQ6UWF9 173 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 IGFL2Q6UWQ7 119 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 AMZ2Q86W34 360 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 VSIG1Q86XK7 387 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 ZNF808Q8N4W9 903 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 PLD5Q8N7P1 536 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 OR4E2Q8NGC2 313 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 GDAP1Q8TB36 358 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 MAML1Q92585 1016 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 DHRS4Q9BTZ2 278 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 SLC24A2Q9UI40 661 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 TFR2Q9UP52 801 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 CDYLQ9Y232 598 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 HYOU1Q9Y4L1 999 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
SHKBP1-208ENST00000595726 MATN3O15232 486 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 SPOPO43791 374 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 IGHEP01854 428 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 KRT1P04264 644 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 HLA-DQB2P05538 268 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 UMODP07911 640 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 PVRP15151 417 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 ST6GAL1P15907 406 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 COMTP21964 271 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 CES1P23141 567 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 CCNCP24863 283 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 SSTR2P30874 369 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 CD86P42081 329 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 KIR3DL1P43629 444 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 CTSCP53634 463 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 SLC10A2Q12908 348 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 XRCC4Q13426 336 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 CDSNQ15517 529 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 IFI16Q16666 785 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 CYP2A13Q16696 494 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 ATP13A5Q4VNC0 1218 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 SLC9A4Q6AI14 798 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 ZNF324BQ6AW86 544 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 TMC3Q7Z5M5 1100 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 FATE1Q969F0 183 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 HDAC11Q96DB2 347 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 TSGA13Q96PP4 275 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 DPH2Q9BQC3 489 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 GOLPH3Q9H4A6 298 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 BPIFA1Q9NP55 256 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 SUCOQ9UBS9 1254 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 GPN3Q9UHW5 284 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 NEU2Q9Y3R4 380 aa13.31□□□□□ -0.28
SHKBP1-208ENST00000595726 ACANP16112 2415 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 A0A0A6YYK5 440 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 E7EQ34 232 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 PCDH17O14917 1159 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 KCNN4O15554 427 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 CTSBP07858 339 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 TNNT1P13805 278 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 MX2P20592 715 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 CA4P22748 312 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 TDGF1P3P51864 188 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 DCDC1P59894 354 aa13.3□□□□□ -0.28
SHKBP1-208ENST00000595726 AIMP2Q13155 320 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms