RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SLC7A5P2Q9GIP4 190 aa14.34□□□□□ -0.11
PNKP-202ENST00000593706 LATS2Q9NRM7 1088 aa14.34□□□□□ -0.11
PNKP-202ENST00000593706 LUZP4Q9P127 313 aa14.34□□□□□ -0.11
PNKP-202ENST00000593706 PACSIN2Q9UNF0 486 aaPredicted RBP14.34□□□□□ -0.11
PNKP-202ENST00000593706 ARL5AQ9Y689 179 aa14.34□□□□□ -0.11
PNKP-202ENST00000593706 COLEC10Q9Y6Z7 277 aa14.34□□□□□ -0.11
PNKP-202ENST00000593706 DIDO1Q9BTC0 2240 aaKnown RBP14.34□□□□□ -0.11
PNKP-202ENST00000593706 MIF4GDA9UHW6 222 aaKnown RBP14.33□□□□□ -0.12
PNKP-202ENST00000593706 TMEM150CB9EJG8 249 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 MEN1O00255 615 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 MAP3K7O43318 606 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 DPM1O60762 260 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 SORBS2O94875 1100 aaKnown RBP14.33□□□□□ -0.12
PNKP-202ENST00000593706 POLBP06746 335 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 RALBP11234 206 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 NDUFS1P28331 727 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 ADRA1AP35348 466 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 ABRQ12979 859 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 PAPD7Q5XG87 772 aaKnown RBP14.33□□□□□ -0.12
PNKP-202ENST00000593706 ZNF517Q6ZMY9 492 aaPredicted RBP14.33□□□□□ -0.12
PNKP-202ENST00000593706 PEX26Q7Z412 305 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 DSELQ8IZU8 1212 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 SLC38A9Q8NBW4 561 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 OR4E2Q8NGC2 313 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 DCUN1D1Q96GG9 259 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 RMDN2Q96LZ7 410 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 PPM1MQ96MI6 270 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 LRFN5Q96NI6 719 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 FAM118BQ9BPY3 351 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 SLC29A3Q9BZD2 475 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 ASB8Q9H765 288 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 ACTR5Q9H9F9 607 aaPredicted RBP14.33□□□□□ -0.12
PNKP-202ENST00000593706 SLAMF7Q9NQ25 335 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 CRLS1Q9UJA2 301 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 POMT2Q9UKY4 750 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 TCFL5Q9UL49 500 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 MAP4K5Q9Y4K4 846 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 HEBP2Q9Y5Z4 205 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 PCSK5Q92824 1860 aa14.33□□□□□ -0.12
PNKP-202ENST00000593706 SVILO95425 2214 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 SLC9B1P1A6NJY1 282 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 A6NL46 340 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 C2orf81A6NN90 581 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 H7C0C1 242 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 MATN2O00339 956 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 ZNF185O15231 689 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 SRP72O76094 671 aaKnown RBP14.32□□□□□ -0.12
PNKP-202ENST00000593706 RAB40ALP0C0E4 278 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 RBP3P10745 1247 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 ATP5OP48047 213 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 PREPP48147 710 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 RRADP55042 308 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 EIF3EP60228 445 aaKnown RBP14.32□□□□□ -0.12
PNKP-202ENST00000593706 BCL7AQ4VC05 210 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 PRR30Q53SZ7 412 aaPredicted RBP14.32□□□□□ -0.12
PNKP-202ENST00000593706 PRAMEF17Q5VTA0 474 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 FAM69BQ5VUD6 431 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 JMJD6Q6NYC1 403 aaPredicted RBP14.32□□□□□ -0.12
PNKP-202ENST00000593706 CDKL3Q8IVW4 592 aaPredicted RBP14.32□□□□□ -0.12
PNKP-202ENST00000593706 SYTL1Q8IYJ3 562 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 CFAP206Q8IYR0 622 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 TXLNBQ8N3L3 684 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 OR4K2Q8NGD2 314 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 HM13Q8TCT9 377 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 ADAMTS17Q8TE56 1095 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 LCN9Q8WX39 176 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 MFRPQ9BY79 579 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 NLNQ9BYT8 704 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 SRMSQ9H3Y6 488 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 MLXIPLQ9NP71 852 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 C1GALT1Q9NS00 363 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 GPR83Q9NYM4 423 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 FKBPLQ9UIM3 349 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 AMFRQ9UKV5 643 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 PCDHGB7Q9Y5F8 929 aa14.32□□□□□ -0.12
PNKP-202ENST00000593706 TCRBV7S2A1N4TA0A589 114 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 A1L4Q6 167 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 C9J4A7 227 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 SEMA7AO75326 666 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 CEACAM4O75871 244 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 ANXA9O76027 345 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 TJP3O95049 919 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 AGTP01019 485 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 GEMP55040 296 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 MSLNQ13421 630 aaPredicted RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 TAF1AQ15573 450 aaPredicted RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 INPP5JQ15735 1006 aaPredicted RBP14.31□□□□□ -0.12
PNKP-202ENST00000593706 PTCHD3Q3KNS1 767 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 ANKRD20A2Q5SQ80 823 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 PLEKHS1Q5SXH7 462 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 ANKRD20A1Q5TYW2 823 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 ANKRD20A3Q5VUR7 823 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 LCN10Q6JVE6 187 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 FAM198BQ6UWH4 519 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 RANBP10Q6VN20 620 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 MED25Q71SY5 747 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 RAB43Q86YS6 212 aa14.31□□□□□ -0.12
PNKP-202ENST00000593706 HPS6Q86YV9 775 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms