RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 MAZP56270 477 aaKnown RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 INSM1Q01101 510 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 TARDBPQ13148 414 aaKnown RBP eCLIP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 CLCA4Q14CN2 919 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ELOCQ15369 112 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 NR0B2Q15466 257 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 CCSMST1Q4G0I0 132 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 FAM219BQ5XKK7 198 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 FAM45BPQ6NSW5 357 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 EFL1Q7Z2Z2 1120 aaKnown RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 TAF8Q7Z7C8 310 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 AMZ2Q86W34 360 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF761Q86XN6 746 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 SLC35F3Q8IY50 421 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 C4orf33Q8N1A6 199 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 FSTL5Q8N475 847 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 FAM181AQ8N9Y4 354 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 KYQ8NBH2 561 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 OR2L2Q8NH16 312 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 FAM45AQ8TCE6 357 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 HM13Q8TCT9 377 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 GPBAR1Q8TDU6 330 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 EEF1AKMT1Q8WVE0 214 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 KCTD4Q8WVF5 259 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ZCCHC14Q8WYQ9 949 aaKnown RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 KCNJ9Q92806 393 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ARL8AQ96BM9 186 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 LINGO1Q96FE5 620 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 LINC00615Q96LM1 132 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 TIMM29Q9BSF4 260 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ABCG4Q9H172 646 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 VPS11Q9H270 941 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 OR52A5Q9H2C5 316 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 CENPHQ9H3R5 247 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 IGSF5Q9NSI5 407 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ARGLU1Q9NWB6 273 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 NSMCE4AQ9NXX6 385 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 TAAR2Q9P1P5 351 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 SLC24A2Q9UI40 661 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 TRMT6Q9UJA5 497 aaKnown RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF180Q9UJW8 692 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ADAMTS6Q9UKP5 1117 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 PLAGL1Q9UM63 463 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 GPR34Q9UPC5 381 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 VWA7Q9Y334 891 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 PCDHB1Q9Y5F3 818 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 TRABD2BA6NFA1 517 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 MGAT4DA6NG13 374 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 CDC7O00311 574 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 RASGRF2O14827 1237 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 OPA1O60313 960 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 VPS26AO75436 327 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 GPC4O75487 556 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 TCEA3O75764 348 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 FTH1P02794 183 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF37AP17032 561 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 GLRBP48167 497 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 SERPINB8P50452 374 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 RAB10P61026 200 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 ABRQ12979 859 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 ILKQ13418 452 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 GBX1Q14549 363 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 TTMPQ5BVD1 217 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 PERM1Q5SV97 790 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 MBOAT1Q6ZNC8 495 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 CDHR3Q6ZTQ4 885 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 OTOAQ7RTW8 1153 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 TMPRSS12Q86WS5 348 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 GKN2Q86XP6 184 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 CENPLQ8N0S6 344 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 FAM46DQ8NEK8 389 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 CFAP61Q8NHU2 1237 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 MDM1Q8TC05 714 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 MAPK15Q8TD08 544 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 HEXDCQ8WVB3 486 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 SCG3Q8WXD2 468 aaKnown RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 DLG3Q92796 817 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 ISL2Q96A47 359 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 TTC1Q99614 292 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 CCDC68Q9H2F9 335 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 SYNDIG1Q9H7V2 258 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 RMI1Q9H9A7 625 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 IMP3Q9NV31 184 aaKnown RBP9.42□□□□□ -0.9
DDX39A-220ENST00000593008 LGALS13Q9UHV8 139 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 ZMIZ1Q9ULJ6 1067 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 IKBKGQ9Y6K9 419 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 ZZEF1O43149 2961 aa9.42□□□□□ -0.9
DDX39A-220ENST00000593008 DMXL2Q8TDJ6 3036 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 A0A096LPK6 155 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 F8W8V4 182 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 ZBTB14O43829 449 aa9.41□□□□□ -0.9
DDX39A-220ENST00000593008 SPAG7O75391 227 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms