RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 KLQ9UEF7 1012 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 ZNF490Q9ULM2 529 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 PCDHB3Q9Y5E6 796 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 TCRBV5S2A0A599 114 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 ENO4A6NNW6 628 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 MANBAO00462 879 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 KPNA5O15131 536 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 CCL16O15467 120 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 CLDN9O95484 217 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 UGT2B4P06133 528 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 MPC1LP0DKB6 136 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 CYP2A6P11509 494 aaPredicted RBP18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 AKT1P31749 480 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 SPINT3P49223 89 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 RPIAP49247 311 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 RPL38P63173 70 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 TMTC4Q5T4D3 741 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 KRT80Q6KB66 452 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 DLEU7Q6UYE1 221 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 DPY19L3Q6ZPD9 716 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 CARM1Q86X55 608 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 ADGRG2Q8IZP9 1017 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 GALNT15Q8N3T1 639 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 NAT14Q8WUY8 206 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 ZFAND2BQ8WV99 257 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 CGREF1Q99674 301 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 SMG9Q9H0W8 520 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 ACTL8Q9H568 366 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 PIDD1Q9HB75 910 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 INTS7Q9NVH2 962 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 AP3M1Q9Y2T2 418 aa18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 ZFC3H1O60293 1989 aaKnown RBP18.78■□□□□ 0.6
PRKCSH-209ENST00000589838 GMNNO75496 209 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 KCNH1O95259 989 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 HIST1H2AGP0C0S8 130 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 ZNF30P17039 623 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 CKMT2P17540 419 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 HIST1H2ADP20671 130 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 AOAHP28039 575 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 GGT5P36269 586 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 GDF5P43026 501 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 GDPD4Q6W3E5 623 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 RTL10Q7L3V2 364 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 LRRC70Q7Z2Q7 622 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 TMEM25Q86YD3 366 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 OR8J3Q8NGG0 315 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 VOPP1Q96AW1 172 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 DGCR14Q96DF8 476 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 HIST1H2AHQ96KK5 128 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 TMEM74Q96NL1 305 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 PRPF18Q99633 342 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 HIST1H2AJQ99878 128 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 H2AFJQ9BTM1 129 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 BBS2Q9BXC9 721 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 ANKRD60Q9BZ19 345 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 DPY30Q9C005 99 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 PARVBQ9HBI1 364 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 LRTM1Q9HBL6 345 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 RAD18Q9NS91 495 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 PNPLA3Q9NST1 481 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 ARL15Q9NXU5 204 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SLAMF8Q9P0V8 285 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 TBC1D14Q9P2M4 693 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 RNF11Q9Y3C5 154 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SAC3D1A6NKF1 404 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SOBPA7XYQ1 873 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 LOC730098B7Z3J9 87 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 WASH3PC4AMC7 463 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 NEDD8-MDP1E9PL57 170 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SOCS2O14508 198 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 FFAR3O14843 346 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC16A5O15375 505 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 GPR42O15529 346 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 PGM3O95394 542 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 IL6P05231 212 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 C1SP09871 688 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 MTHFD1P11586 935 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 LHCGRP22888 699 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 GSTT1P30711 240 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 CCR7P32248 378 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 HNMTP50135 292 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 YBX1P67809 324 aaKnown RBP18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 PLEKHS1Q5SXH7 462 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 ELMSAN1Q6PJG2 1045 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 BRAT1Q6PJG6 821 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 UBE2R2Q712K3 238 aaPredicted RBP18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 FAM9CQ8IZT9 166 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 KLHL23Q8NBE8 558 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 TNIP2Q8NFZ5 429 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 OSCP1Q8WVF1 389 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 NCSTNQ92542 709 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 NSMCE2Q96MF7 247 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 HBEGFQ99075 208 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC12A9Q9BXP2 914 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 TRIM4Q9C037 500 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC24A3Q9HC58 644 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 B4GALT6Q9UBX8 382 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 AK5Q9Y6K8 562 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 COMMD3-BMI1R4GMX3 469 aa18.77■□□□□ 0.6
PRKCSH-209ENST00000589838 MTCL1Q9Y4B5 1905 aaKnown RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms