RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR1L3Q8NH93 324 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 SGSM3Q96HU1 749 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 NUDT9Q9BW91 350 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 CHRNA10Q9GZZ6 450 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 GBA3Q9H227 469 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 ABHD10Q9NUJ1 306 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 SPTLC3Q9NUV7 552 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 PADI2Q9Y2J8 665 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
VMP1-209ENST00000588915 ARL5AQ9Y689 179 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 PRRC2CQ9Y520 2896 aaKnown RBP13.58□□□□□ -0.24
VMP1-209ENST00000588915 SPTBP11277 2137 aa13.58□□□□□ -0.24
VMP1-209ENST00000588915 WIPF3A6NGB9 483 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 TMEM150CB9EJG8 249 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 C9J4A7 227 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 E7EQ34 232 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 ZNF185O15231 689 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 ATP1B2P14415 290 aaPredicted RBP13.57□□□□□ -0.24
VMP1-209ENST00000588915 ADRA1AP35348 466 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 ARCN1P48444 511 aaKnown RBP13.57□□□□□ -0.24
VMP1-209ENST00000588915 SSPNQ14714 243 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 EIF2S3LQ2VIR3 472 aaKnown RBP13.57□□□□□ -0.24
VMP1-209ENST00000588915 GPR33Q49SQ1 333 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 PRAMEF17Q5VTA0 474 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 ZNF385CQ66K41 422 aaPredicted RBP13.57□□□□□ -0.24
VMP1-209ENST00000588915 FBXO38Q6PIJ6 1188 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 SARM1Q6SZW1 724 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 IGFL3Q6UXB1 125 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 SNX20Q7Z614 316 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.57□□□□□ -0.24
VMP1-209ENST00000588915 RBM41Q96IZ5 413 aaKnown RBP13.57□□□□□ -0.24
VMP1-209ENST00000588915 FER1L6-AS2Q96M78 137 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 PPP1R2P1Q96PQ5 205 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 FERD3LQ96RJ6 166 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 COPS8Q99627 209 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 SLC7A5P2Q9GIP4 190 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 OR52A5Q9H2C5 316 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 VPS37BQ9H9H4 285 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 FEZ2Q9UHY8 353 aaPredicted RBP13.57□□□□□ -0.24
VMP1-209ENST00000588915 FKBPLQ9UIM3 349 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 CRLS1Q9UJA2 301 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.57□□□□□ -0.24
VMP1-209ENST00000588915 HYOU1Q9Y4L1 999 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 AP1M2Q9Y6Q5 423 aa13.57□□□□□ -0.24
VMP1-209ENST00000588915 IGLV3-16A0A075B6K0 115 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 CCDC66A2RUB6 948 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 GSAPA4D1B5 854 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 C2orf74A8MZ97 194 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 APOC4-APOC2K7ER74 178 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 BTN3A3O00478 584 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 ZNF749O43361 778 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 LCA5LO95447 670 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 APOC2P02655 101 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 ST6GAL1P15907 406 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 ITGALP20701 1170 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 COPS2P61201 443 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 MSLNQ13421 630 aaPredicted RBP13.56□□□□□ -0.24
VMP1-209ENST00000588915 PRPSAP1Q14558 356 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 VWA5B1Q5TIE3 1220 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 BBS12Q6ZW61 710 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 AMIGO1Q86WK6 493 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 GPR135Q8IZ08 494 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 IQCKQ8N0W5 287 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 NXPE1Q8N323 547 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 OR52E1Q8NGJ3 308 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 FICDQ9BVA6 458 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 COG4Q9H9E3 785 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 ARNT2Q9HBZ2 717 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 ZDHHC3Q9NYG2 299 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 EFR3BQ9Y2G0 817 aa13.56□□□□□ -0.24
VMP1-209ENST00000588915 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 F5H423 210 aaPredicted RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 BTN3A1O00481 513 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 ZNF189O75820 626 aaPredicted RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 KLF7O75840 302 aaPredicted RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 IPO13O94829 963 aaKnown RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 ALPPP05187 535 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 RBL1P28749 1068 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 SOX8P57073 446 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 LLGL1Q15334 1064 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 ZNF658BQ4V348 819 aaPredicted RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 RHBDD2Q6NTF9 364 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 VSTM4Q8IW00 320 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 ADGRF3Q8IZF5 1079 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 LILRA3Q8N6C8 439 aaPredicted RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 TFGQ92734 400 aaPredicted RBP13.55□□□□□ -0.24
VMP1-209ENST00000588915 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 LRRC45Q96CN5 670 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 TCTN2Q96GX1 697 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 CASS4Q9NQ75 786 aa13.55□□□□□ -0.24
VMP1-209ENST00000588915 DOPEY1Q5JWR5 2465 aa13.54□□□□□ -0.24
VMP1-209ENST00000588915 MYO9AB2RTY4 2548 aa13.54□□□□□ -0.24
VMP1-209ENST00000588915 TRBV5-4A0A0C4DH59 114 aa13.54□□□□□ -0.24
VMP1-209ENST00000588915 A6NL46 340 aa13.54□□□□□ -0.24
VMP1-209ENST00000588915 H7C0C1 242 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms