RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 PCM1Q15154 2024 aa11.33□□□□□ -0.6
LRFN3-202ENST00000585876 ANKRD12Q6UB98 2062 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 FAM149AA5PLN7 773 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 IQCF5A8MTL0 148 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 EIF3FO00303 357 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 IFRD1O00458 451 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 NIPSNAP2O75323 286 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 SPAG6O75602 509 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 DXOO77932 396 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 UBXN7O94888 489 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 C1QAP02745 245 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 C9P02748 559 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 CAPNS1P04632 268 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 THRAP10827 490 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 GABRB3P28472 473 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 MLLT3P42568 568 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 CLCN7P51798 805 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 LIMK2P53671 638 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 MPP1Q00013 466 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 MGAT5Q09328 741 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 ILF2Q12905 390 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 EIF3IQ13347 325 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 TRA2AQ13595 282 aaKnown RBP eCLIP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 TEDDM1Q5T9Z0 273 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 DUS1LQ6P1R4 473 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 UNC5DQ6UXZ4 953 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 OTOAQ7RTW8 1153 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 B3GNT8Q7Z7M8 397 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 SLC26A11Q86WA9 606 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 ZNF761Q86XN6 746 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 VRK3Q8IV63 474 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 KRT222Q8N1A0 295 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 PYROXD1Q8WU10 500 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 TFGQ92734 400 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 MCMBPQ9BTE3 642 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 TBC1D10AQ9BXI6 508 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 TSPYL1Q9H0U9 437 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 TFB2MQ9H5Q4 396 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 RDH14Q9HBH5 336 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 SAYSD1Q9NPB0 183 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 FBXO6Q9NRD1 293 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 IARS2Q9NSE4 1012 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 EPHA6Q9UF33 1036 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 ATXN7L1Q9ULK2 861 aaPredicted RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 PCDHGA8Q9Y5G5 932 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 CFAP20Q9Y6A4 193 aaKnown RBP11.32□□□□□ -0.6
LRFN3-202ENST00000585876 COLEC10Q9Y6Z7 277 aa11.32□□□□□ -0.6
LRFN3-202ENST00000585876 CCDC187A0A096LP49 1063 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 PRAMEF33A0A0G2JMD5 474 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 A0A1W2PNU3 283 aaPredicted RBP11.31□□□□□ -0.6
LRFN3-202ENST00000585876 TCRBV9S1A1TA0A576 114 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 HGSO14964 777 aaPredicted RBP11.31□□□□□ -0.6
LRFN3-202ENST00000585876 TOX3O15405 576 aaPredicted RBP11.31□□□□□ -0.6
LRFN3-202ENST00000585876 HAUS5O94927 633 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 MATN4O95460 622 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 AHSGP02765 367 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 PROS1P07225 676 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 ANKRD34CP0C6C1 535 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 FMO4P31512 558 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 INHBCP55103 352 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 CUL1Q13616 776 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 AMZ1Q400G9 498 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 NKAIN2Q5VXU1 208 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 TMEM71Q6P5X7 295 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 KLHL35Q6PF15 583 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 CNSTQ6PJW8 725 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 RASGRP3Q8IV61 690 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 TBC1D21Q8IYX1 336 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 ZBTB2Q8N680 514 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 OR5K2Q8NHB8 316 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 GIMAP7Q8NHV1 300 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 ATXN7L3BQ96GX2 97 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
LRFN3-202ENST00000585876 STRADBQ9C0K7 418 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 SYNDIG1Q9H7V2 258 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 NSMCE4AQ9NXX6 385 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 ZFATQ9P243 1243 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 SEMA5BQ9P283 1151 aa11.31□□□□□ -0.6
LRFN3-202ENST00000585876 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 FAM159BA6NKW6 160 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 RPN2P04844 631 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 HOXB3P14651 431 aaPredicted RBP11.3□□□□□ -0.6
LRFN3-202ENST00000585876 ITGB6P18564 788 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 SSTR1P30872 391 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 MAGEA4P43358 317 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 LSSP48449 732 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 CARSP49589 748 aaKnown RBP11.3□□□□□ -0.6
LRFN3-202ENST00000585876 GPX6P59796 221 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 TIAL1Q01085 375 aaKnown RBP eCLIP11.3□□□□□ -0.6
LRFN3-202ENST00000585876 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 NAPRTQ6XQN6 538 aa11.3□□□□□ -0.6
LRFN3-202ENST00000585876 PRSS42Q7Z5A4 293 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms