RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 LHX6Q9UPM6 363 aa13.56□□□□□ -0.24
TRAF4-215ENST00000584944 ASF1AQ9Y294 204 aa13.56□□□□□ -0.24
TRAF4-215ENST00000584944 ST14Q9Y5Y6 855 aa13.56□□□□□ -0.24
TRAF4-215ENST00000584944 NBEAQ8NFP9 2946 aa13.56□□□□□ -0.24
TRAF4-215ENST00000584944 EXOC1LA0A1B0GW35 172 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 FAM159BA6NKW6 160 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 NOBOXO60393 691 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 GIMD1P0DJR0 217 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 XRCC1P18887 633 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 ACP1P24666 158 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 AOAHP28039 575 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 ECHS1P30084 290 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 MSH2P43246 934 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 ABCG1P45844 678 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 RPE65Q16518 533 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 AMZ1Q400G9 498 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 ZNF789Q5FWF6 425 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 GRTP1Q5TC63 336 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 LRRC8EQ6NSJ5 796 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 ARMC6Q6NXE6 501 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 RAB42Q8N4Z0 105 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 WDR48Q8TAF3 677 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 TFGQ92734 400 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 INPP5DQ92835 1189 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 AARSD1Q9BTE6 412 aaKnown RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 TRIT1Q9H3H1 467 aaKnown RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 RHOJQ9H4E5 214 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 SLC39A10Q9ULF5 831 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 VWA7Q9Y334 891 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 CFAP20Q9Y6A4 193 aaKnown RBP13.55□□□□□ -0.24
TRAF4-215ENST00000584944 RNF215Q9Y6U7 377 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 CELSR3Q9NYQ7 3312 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 KNTC1P50748 2209 aa13.55□□□□□ -0.24
TRAF4-215ENST00000584944 LRP4O75096 1905 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 FASNP49327 2511 aaKnown RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 EME2A4GXA9 379 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 POC1B-GALNT4F8VUJ3 575 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ERLIN1O75477 346 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 PIAS1O75925 651 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 EML2O95834 649 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 FAM153BP0C7A2 387 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 PNLIPP16233 465 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 AMD1P17707 334 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 MAP4P27816 1152 aaKnown RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 GPR3P46089 330 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 FASLGP48023 281 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ACADVLP49748 655 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ABRQ12979 859 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 SPIDRQ14159 915 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 CLCA4Q14CN2 919 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 FAM153CQ494X1 144 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 LGSNQ5TDP6 509 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 HECTD2Q5U5R9 776 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 WDR93Q6P2C0 686 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 RAPH1Q70E73 1250 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 TMPRSS7Q7RTY8 843 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ZC3HC1Q86WB0 502 aaKnown RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 LILRA3Q8N6C8 439 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 SIDT2Q8NBJ9 832 aaKnown RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 SPDYE1Q8NFV5 336 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 MAGEC3Q8TD91 643 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 GFM1Q96RP9 751 aaKnown RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 GPR21Q99679 349 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ACSS3Q9H6R3 686 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 MVB12BQ9H7P6 319 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 PLAC1Q9HBJ0 212 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 POLG2Q9UHN1 485 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 WDR37Q9Y2I8 494 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 TDRKHQ9Y2W6 561 aaKnown RBP13.54□□□□□ -0.24
TRAF4-215ENST00000584944 PCDHGA1Q9Y5H4 931 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 PSAT1Q9Y617 370 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
TRAF4-215ENST00000584944 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 SLC5A10A0PJK1 596 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 A6NCN8 305 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 DUX1O43812 170 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 KRT38O76015 456 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 RPLP0P05388 317 aaKnown RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 CBSLP0DN79 551 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 ENO3P13929 434 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 PDHA2P29803 388 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 ATP5DP30049 168 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 CBSP35520 551 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 IL2P60568 153 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 VSNL1P62760 191 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 POU4F1Q01851 419 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 USP10Q14694 798 aaKnown RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 EMBQ6PCB8 327 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 SFTPA2Q8IWL1 248 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 SLC22A15Q8IZD6 547 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 MYO1HQ8N1T3 1032 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 LKAAEAR1Q8TD35 194 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 LCN9Q8WX39 176 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 RMDN2Q96LZ7 410 aa13.53□□□□□ -0.24
TRAF4-215ENST00000584944 INSM2Q96T92 566 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-215ENST00000584944 RBBP8Q99708 897 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms