RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CLSTN2Q9H4D0 955 aa12.15□□□□□ -0.46
CSNK1D-218ENST00000581655 MCCC2Q9HCC0 563 aa12.15□□□□□ -0.46
CSNK1D-218ENST00000581655 FAM8A1Q9UBU6 413 aa12.15□□□□□ -0.46
CSNK1D-218ENST00000581655 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-218ENST00000581655 AP1M2Q9Y6Q5 423 aa12.15□□□□□ -0.46
CSNK1D-218ENST00000581655 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.47
CSNK1D-218ENST00000581655 BTN3A1O00481 513 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 GPR39O43194 453 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A9O60656 530 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 KLHL18O94889 574 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 CD99P14209 185 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A6P19224 532 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A1P22309 533 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A4P22310 534 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 MMP11P24347 488 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 NDUFS1P28331 727 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 ART1P52961 327 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 SRSF11Q05519 484 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 Q0VFX4 171 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 MFAP5Q13361 173 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 KRT33BQ14525 404 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 KRT81Q14533 505 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 GSE1Q14687 1217 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 PAFAH1B3Q15102 231 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 CDSNQ15517 529 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 FAM182AQ5T1J6 154 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 PPP1R2P3Q6NXS1 205 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 ISLR2Q6UXK2 745 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 BEND7Q8N7W2 519 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 NEK11Q8NG66 645 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 FATE1Q969F0 183 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 RMDN2Q96LZ7 410 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 NRTNQ99748 197 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 SRMSQ9H3Y6 488 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 DEF6Q9H4E7 631 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 FAM60AQ9NP50 221 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 TXLNGQ9NUQ3 528 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 CDC23Q9UJX2 597 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 COLEC10Q9Y6Z7 277 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 ABCA4P78363 2273 aa12.14□□□□□ -0.47
CSNK1D-218ENST00000581655 H3BMH7 237 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 KCNK1O00180 336 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 BTN3A3O00478 584 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 SOCS6O14544 535 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 HCRTR1O43613 425 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 MT-CYBP00156 380 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 CTSBP07858 339 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 CD48P09326 243 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 SLC35G4P0C7Q5 338 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 KRT31Q15323 416 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 PCSK7Q16549 785 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 FNBP1LQ5T0N5 605 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 ZNF655Q8N720 491 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 CNTD1Q8N815 330 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 ACVR1CQ8NER5 493 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 LCN9Q8WX39 176 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 NACC2Q96BF6 587 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 THOC3Q96J01 351 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 NDC1Q9BTX1 674 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 XPO4Q9C0E2 1151 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 IL26Q9NPH9 171 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 SLC22A11Q9NSA0 550 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 ACSL5Q9ULC5 683 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 SPO11Q9Y5K1 396 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 ZNF469Q96JG9 3925 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-218ENST00000581655 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 ZSCAN9O15535 394 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 SNRNP200O75643 2136 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 CLDN14O95500 239 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 POLBP06746 335 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 FERP16591 822 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 AGAP20933 346 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 MST1P26927 711 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 SMSP52788 366 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 ARG2P78540 354 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 INAQ16352 499 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 TUBB8Q3ZCM7 444 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 GPRC6AQ5T6X5 926 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 KIRREL2Q6UWL6 708 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 DET1Q7L5Y6 550 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 C19orf47Q8N9M1 422 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 DDHD1Q8NEL9 900 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 ANKRD20A12PQ8NF67 263 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 NAT14Q8WUY8 206 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 LMF1Q96S06 567 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 SEC14L3Q9UDX4 400 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
CSNK1D-218ENST00000581655 AKAP6Q13023 2319 aa12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-218ENST00000581655 TPM2P07951 284 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms