RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ARMC6Q6NXE6 501 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 RFX8Q6ZV50 586 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 CHSY3Q70JA7 882 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 TRAPPC5Q8IUR0 188 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 CCDC71Q8IV32 467 aaPredicted RBP10.64□□□□□ -0.71
GGA3-206ENST00000578773 ZZZ3Q8IYH5 903 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 VWA5B2Q8N398 1253 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 PHF10Q8WUB8 498 aaKnown RBP10.64□□□□□ -0.71
GGA3-206ENST00000578773 RMND5BQ96G75 393 aaPredicted RBP10.64□□□□□ -0.71
GGA3-206ENST00000578773 WWP1Q9H0M0 922 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 DHX35Q9H5Z1 703 aaKnown RBP10.64□□□□□ -0.71
GGA3-206ENST00000578773 CTSFQ9UBX1 484 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 NOCTQ9UK39 431 aaKnown RBP10.64□□□□□ -0.71
GGA3-206ENST00000578773 AP4E1Q9UPM8 1137 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 ZNF407Q9C0G0 2248 aa10.64□□□□□ -0.71
GGA3-206ENST00000578773 MEGF8Q7Z7M0 2845 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 FOXO6A8MYZ6 492 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 NPIPA5E9PKD4 350 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 OR2B3O76000 313 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 CDK14O94921 469 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 ATE1O95260 518 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 PIRTP0C851 137 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 ZSCAN22P10073 491 aaPredicted RBP10.63□□□□□ -0.71
GGA3-206ENST00000578773 CHRNB2P17787 502 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 HLA-DPA1P20036 260 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 PRDX3P30048 256 aaKnown RBP10.63□□□□□ -0.71
GGA3-206ENST00000578773 SPAM1P38567 509 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 RPL7AP62424 266 aaKnown RBP10.63□□□□□ -0.71
GGA3-206ENST00000578773 CACNG1Q06432 222 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 NKG7Q16617 165 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 HIBCHQ6NVY1 386 aaPredicted RBP10.63□□□□□ -0.71
GGA3-206ENST00000578773 CDC20BQ86Y33 519 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 NELFBQ8WX92 580 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 HAS2Q92819 552 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 ZNF599Q96NL3 588 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 NUP85Q9BW27 656 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 TDRD1Q9BXT4 1180 aaKnown RBP10.63□□□□□ -0.71
GGA3-206ENST00000578773 PITPNM3Q9BZ71 974 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 PKD2L2Q9NZM6 624 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 FAM8A1Q9UBU6 413 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 NPIPA1Q9UND3 350 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 RNF6Q9Y252 685 aa10.63□□□□□ -0.71
GGA3-206ENST00000578773 TGP01266 2768 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 E9PLN8 166 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 SMAD7O15105 426 aaKnown RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 PRAMEF1O95521 474 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 LSM8O95777 96 aaKnown RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 HBQ1P09105 142 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 PRR35P0CG20 571 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 KRT3P12035 628 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 MMP13P45452 471 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 XRCC4Q13426 336 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 RBBP7Q16576 425 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 QPCTQ16769 361 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 DEFB113Q30KQ7 82 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 PAMR1Q6UXH9 720 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 GBP6Q6ZN66 633 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 SIAH3Q8IW03 269 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 CARFQ8N187 725 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 TAB3Q8N5C8 712 aaPredicted RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 LILRA3Q8N6C8 439 aaPredicted RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 METTL27Q8N6F8 245 aaPredicted RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 BEND7Q8N7W2 519 aaPredicted RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 ACRBPQ8NEB7 543 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 PROKR1Q8TCW9 393 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 LRRN4Q8WUT4 740 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 ZFPM2Q8WW38 1151 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 COX4I2Q96KJ9 171 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 RMDN2Q96LZ7 410 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 C12orf66Q96MD2 445 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 C17orf62Q9BQA9 187 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 VKORC1Q9BQB6 163 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 SNRNP25Q9BV90 132 aaKnown RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 AP1M1Q9BXS5 423 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 VPS16Q9H269 839 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 CLEC4MQ9H2X3 399 aaPredicted RBP10.62□□□□□ -0.71
GGA3-206ENST00000578773 KIR3DX1Q9H7L2 352 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 L3MBTL1Q9Y468 752 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 ASB1Q9Y576 335 aa10.62□□□□□ -0.71
GGA3-206ENST00000578773 ARID1AO14497 2285 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 FAM237BA0A1B0GVD1 139 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 H7C1Q1 480 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 PSMA7O14818 248 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
GGA3-206ENST00000578773 POP7O75817 140 aaKnown RBP10.61□□□□□ -0.71
GGA3-206ENST00000578773 CYP1A1P04798 512 aaPredicted RBP10.61□□□□□ -0.71
GGA3-206ENST00000578773 ABOP16442 354 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 HSPA9P38646 679 aaKnown RBP10.61□□□□□ -0.71
GGA3-206ENST00000578773 GCGRP47871 477 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 FMO1Q01740 532 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 ITKQ08881 620 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 NIPAL4Q0D2K0 466 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 DPYSQ14117 519 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 EXOC3L4Q17RC7 722 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 PRSS58Q8IYP2 241 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 GPR135Q8IZ08 494 aa10.61□□□□□ -0.71
GGA3-206ENST00000578773 RASGEF1AQ8N9B8 481 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms