RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 CPSF6Q16630 551 aaKnown RBP eCLIP17.21■□□□□ 0.35
ERBB2-205ENST00000578199 ZXDCQ2QGD7 858 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-205ENST00000578199 IRAK1BP1Q5VVH5 260 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 GRAMD4Q6IC98 578 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 DNAJC14Q6Y2X3 702 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-205ENST00000578199 MACC1Q6ZN28 852 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 TMEM25Q86YD3 366 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 TRIML2Q8N7C3 387 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 SKA2Q8WVK7 121 aaPredicted RBP17.21■□□□□ 0.35
ERBB2-205ENST00000578199 RBM38Q9H0Z9 239 aaKnown RBP17.21■□□□□ 0.35
ERBB2-205ENST00000578199 EPB41L1Q9H4G0 881 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 NEUROG3Q9Y4Z2 214 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 H3BNH8 94 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 LRG1P02750 347 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 UGT2B4P06133 528 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 GPIP06744 558 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 PCNAP12004 261 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 CSF2RAP15509 400 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 CCR2P41597 374 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 HSPA14Q0VDF9 509 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 INTS11Q5TA45 600 aaKnown RBP17.21■□□□□ 0.35
ERBB2-205ENST00000578199 TBPL2Q6SJ96 375 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 RGL4Q8IZJ4 473 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 DTWD1Q8N5C7 304 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 CYGBQ8WWM9 190 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 FBXL20Q96IG2 436 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 MPP4Q96JB8 637 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 VPS50Q96JG6 964 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 CGREF1Q99674 301 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 MYRFQ9Y2G1 1151 aa17.21■□□□□ 0.35
ERBB2-205ENST00000578199 K7EPI3 171 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 ULK1O75385 1050 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 SEC22BO75396 215 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 VARSP26640 1264 aaKnown RBP17.2■□□□□ 0.34
ERBB2-205ENST00000578199 RFC2P35250 354 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 LSAMPQ13449 338 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 KIAA0040Q15053 153 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 ATP6AP1Q15904 470 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 FAM174BQ3ZCQ3 159 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 SULT1C3Q6IMI6 304 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 DPY19L3Q6ZPD9 716 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 LIX1Q8N485 282 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 CHST14Q8NCH0 376 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 MAGEE2Q8TD90 523 aaPredicted RBP17.2■□□□□ 0.34
ERBB2-205ENST00000578199 PYCR2Q96C36 320 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 SCRN2Q96FV2 425 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 RMND5BQ96G75 393 aaPredicted RBP17.2■□□□□ 0.34
ERBB2-205ENST00000578199 ADI1Q9BV57 179 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 CCL16O15467 120 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 LILRB3O75022 631 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 LAG3P18627 525 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 HTR1EP28566 365 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 RPIAP49247 311 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 NEK2P51955 445 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 SLC7A9P82251 487 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 MERTKQ12866 999 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 SUSD1Q6UWL2 747 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 OFCC1Q8IZS5 231 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 DPP10Q8N608 796 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 ULK4Q96C45 1275 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 CHID1Q9BWS9 393 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 SUV39H2Q9H5I1 410 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 IKZF5Q9H5V7 419 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 PNPLA3Q9NST1 481 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 ARL15Q9NXU5 204 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 NDUFA13Q9P0J0 144 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 TBX21Q9UL17 535 aa17.2■□□□□ 0.34
ERBB2-205ENST00000578199 PARNO95453 639 aaKnown RBP17.19■□□□□ 0.34
ERBB2-205ENST00000578199 EPB42P16452 691 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 CSNK1DP48730 415 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 NR1H2P55055 460 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 SNRPD1P62314 119 aaKnown RBP17.19■□□□□ 0.34
ERBB2-205ENST00000578199 IMPG1Q17R60 797 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 GPR33Q49SQ1 333 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 SPANXN4Q5MJ08 99 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 VRK3Q8IV63 474 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 ZNF786Q8N393 782 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 CPXM2Q8N436 756 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 YME1L1Q96TA2 773 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 BEGAINQ9BUH8 593 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 C9orf16Q9BUW7 83 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 FAM8A1Q9UBU6 413 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 TMPRSS11EQ9UL52 423 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 DENND4CQ5VZ89 1909 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 TRAV19A0A0A6YYK7 116 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 A0A1B0GVG6 124 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 RGS14O43566 566 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 STK16O75716 305 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 FGF18O76093 207 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 C8AP07357 584 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 EPORP19235 508 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 NFKBIAP25963 317 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 NSG1P42857 185 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 MAPK8P45983 427 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 PWP1Q13610 501 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 CRY1Q16526 586 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 C22orf39Q6P5X5 142 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 Q6ZVU0 165 aa17.19■□□□□ 0.34
ERBB2-205ENST00000578199 SLC22A15Q8IZD6 547 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms