RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 POLD2P49005 469 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 DAOAP59103 153 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 ELP6Q0PNE2 266 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 OR4D1Q15615 310 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 FAM187BQ17R55 369 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 UAP1L1Q3KQV9 507 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 CATSPEREQ5SY80 951 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 DCLRE1AQ6PJP8 1040 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 CILP2Q8IUL8 1156 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 MFSD6LQ8IWD5 586 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 LPPQ93052 612 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 VPS35Q96QK1 796 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 CLPBQ9H078 707 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 MROH8Q9H579 483 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 PEX16Q9Y5Y5 336 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 HIST1H2AGP0C0S8 130 aaPredicted RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 CCNYL3P0C7X3 344 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 HIST1H2ADP20671 130 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 HMGB2P26583 209 aaKnown RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 SLC26A2P50443 739 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 YBX1P67809 324 aaKnown RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 EIF3MQ7L2H7 374 aaKnown RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 LRRC52Q8N7C0 313 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 ASIC4Q96FT7 647 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 HIST1H2AHQ96KK5 128 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 PPP1R2P1Q96PQ5 205 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 HIST1H2AJQ99878 128 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 H2AFJQ9BTM1 129 aa10.73□□□□□ -0.69
PALB2-206ENST00000568219 CINPQ9BW66 212 aaPredicted RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 CRNNQ9UBG3 495 aaPredicted RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 NUFIP1Q9UHK0 495 aaKnown RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 ZNF490Q9ULM2 529 aaPredicted RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 DDX60LQ5H9U9 1706 aaKnown RBP10.73□□□□□ -0.69
PALB2-206ENST00000568219 C12orf71A8MTZ7 269 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CREG1O75629 220 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 UPK1BO75841 260 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ALPLP05186 524 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CCNCP24863 283 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CYP2C18P33260 490 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ATN1P54259 1190 aaPredicted RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 RAB14P61106 215 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 USP41Q3LFD5 358 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 RIOX2Q8IUF8 465 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 HS6ST3Q8IZP7 471 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 SVOPLQ8N434 492 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 AGBL3Q8NEM8 1001 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 RHOXF1Q8NHV9 184 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 C12orf42Q96LP6 360 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 APOLD1Q96LR9 279 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 FCRL5Q96RD9 977 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 IL4I1Q96RQ9 567 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 BARD1Q99728 777 aaKnown RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 RHNO1Q9BSD3 238 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ITPAQ9BY32 194 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 MMP28Q9H239 520 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 TRIM45Q9H8W5 580 aaPredicted RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 SDR39U1Q9NRG7 319 aaPredicted RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 GNG14A0A1W2PPG7 69 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 SLC12A8A0AV02 714 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 XPAP23025 273 aaPredicted RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 CRATP43155 626 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 FCHO2Q0JRZ9 810 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 USP43Q70EL4 1123 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 SPRED1Q7Z699 444 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PEX5LQ8IYB4 626 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 AADATQ8N5Z0 425 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 KRTCAP2Q8N6L1 136 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CENPIQ92674 756 aaPredicted RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 TANKQ92844 425 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CRISPLD1Q9H336 500 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PRDM16Q9HAZ2 1276 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ZNF224Q9NZL3 707 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 SLCO3A1Q9UIG8 710 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ZNF222Q9UK12 451 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 UTS2RQ9UKP6 389 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 INTS6Q9UL03 887 aaKnown RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 SLC9A8Q9Y2E8 581 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PRG3Q9Y2Y8 225 aaPredicted RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 PCDHB14Q9Y5E9 798 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ADM5C9JUS6 153 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 OPN1SWP03999 348 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PSKH1P11801 424 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 HNF4AP41235 474 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 OAZ1P54368 228 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 GALNT2Q10471 571 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 ZSWIM7Q19AV6 140 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PLPPR4Q7Z2D5 763 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 SYVN1Q86TM6 617 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PELI3Q8N2H9 469 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 NKAPQ8N5F7 415 aaKnown RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 SMARCD1Q96GM5 515 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 PPP3R2Q96LZ3 170 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CTRCQ99895 268 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 CPNE5Q9HCH3 593 aa10.72□□□□□ -0.69
PALB2-206ENST00000568219 MRPS7Q9Y2R9 242 aaKnown RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 OAS3Q9Y6K5 1087 aaKnown RBP10.72□□□□□ -0.69
PALB2-206ENST00000568219 CTDSP2O14595 271 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 KPNA5O15131 536 aa10.71□□□□□ -0.69
PALB2-206ENST00000568219 ITGB1P05556 798 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms