RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RASGRP3Q8IV61 690 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 MREGQ8N565 214 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 IFI44Q8TCB0 444 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 TFGQ92734 400 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 CCDC74AQ96AQ1 378 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 CAB39LQ9H9S4 337 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 SLC40A1Q9NP59 571 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 LRIT1Q9P2V4 623 aa17.56■□□□□ 0.4
COMMD4-222ENST00000568034 RUVBL2Q9Y230 463 aaKnown RBP17.56■□□□□ 0.4
COMMD4-222ENST00000568034 EXOC1LA0A1B0GW35 172 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 CPED1A4D0V7 1026 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 POC1B-GALNT4F8VUJ3 575 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 IFRD1O00458 451 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-222ENST00000568034 KCNK5O95279 499 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 PNLIPP16233 465 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 CSRP3P50461 194 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 DUSP3P51452 185 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-222ENST00000568034 NOVA1P51513 510 aaKnown RBP17.55■□□□□ 0.4
COMMD4-222ENST00000568034 POU4F1Q01851 419 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 UGT3A1Q6NUS8 523 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 CYHR1Q6ZMK1 362 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 MYRIPQ8NFW9 859 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 OR6C4Q8NGE1 309 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 NAT6Q93015 286 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 CXorf40BQ96DE9 158 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 FETUBQ9UGM5 382 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 ZNF180Q9UJW8 692 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 SLC39A10Q9ULF5 831 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 NFS1Q9Y697 457 aa17.55■□□□□ 0.4
COMMD4-222ENST00000568034 SPEGQ15772 3267 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 DCDC2BA2VCK2 349 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 EIF3FO00303 357 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 MATN4O95460 622 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 VIPP01282 170 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 INHBAP08476 426 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 NUDT17P0C025 328 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 CBSLP0DN79 551 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 ENO3P13929 434 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 ZNF37AP17032 561 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 SAT1P21673 171 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 CBSP35520 551 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 SKIV2L2P42285 1042 aaKnown RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 GPR18Q14330 331 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 USP10Q14694 798 aaKnown RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 TMEM26Q6ZUK4 368 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 NEK10Q6ZWH5 1172 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 PIWIL4Q7Z3Z4 852 aaKnown RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 SLCO6A1Q86UG4 719 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 AVL9Q8NBF6 648 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 PHC3Q8NDX5 983 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 OR5AR1Q8NGP9 310 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 UCK1Q9HA47 277 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 POPDC3Q9HBV1 291 aa17.54■□□□□ 0.4
COMMD4-222ENST00000568034 TSR3Q9UJK0 312 aaKnown RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 COL27A1Q8IZC6 1860 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-222ENST00000568034 DCHS1Q96JQ0 3298 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 LILRA5A6NI73 299 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 RHPN2P1A8MT19 583 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 PHGDHO43175 533 aaKnown RBP17.53■□□□□ 0.4
COMMD4-222ENST00000568034 B4GAT1O43505 415 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 GP1BAP07359 652 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 MPC1LP0DKB6 136 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 MSH2P43246 934 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 ABRQ12979 859 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 PDAP1Q13442 181 aaKnown RBP17.53■□□□□ 0.4
COMMD4-222ENST00000568034 MROH9Q5TGP6 573 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 ADGRD1Q6QNK2 874 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 UNC5DQ6UXZ4 953 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 SPRED1Q7Z699 444 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 CMC1Q7Z7K0 106 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 TRIM48Q8IWZ4 208 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 RBM12BQ8IXT5 1001 aaKnown RBP17.53■□□□□ 0.4
COMMD4-222ENST00000568034 OR5K2Q8NHB8 316 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 EEF1AKMT1Q8WVE0 214 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 ANKRD49Q8WVL7 239 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 ISL2Q96A47 359 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 NRTNQ99748 197 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 CCDC3Q9BQI4 270 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 TBC1D10AQ9BXI6 508 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 STN1Q9H668 368 aaKnown RBP17.53■□□□□ 0.4
COMMD4-222ENST00000568034 KIR3DX1Q9H7L2 352 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 EVA1BQ9NVM1 165 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 EURLQ9NYK6 297 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 IKZF3Q9UKT9 509 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 ASF1AQ9Y294 204 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 PCDHGA1Q9Y5H4 931 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 HEBP2Q9Y5Z4 205 aa17.53■□□□□ 0.4
COMMD4-222ENST00000568034 A0A1W2PQM1 296 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 CCDC151A5D8V7 595 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 RFPL3O75679 317 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 ALDOAP04075 364 aaKnown RBP17.52■□□□□ 0.4
COMMD4-222ENST00000568034 FTH1P19P0C7X4 201 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 TPBGLP0DKB5 382 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 NDUFS1P28331 727 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 GMPRP36959 345 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 MAGEA12P43365 314 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 GPR3P46089 330 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 BDKRB1P46663 353 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 SERPINB9P50453 376 aa17.52■□□□□ 0.4
COMMD4-222ENST00000568034 RAB10P61026 200 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms