RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TNFAIP8O95379 198 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 PABPC1P11940 636 aaKnown RBP18.34■□□□□ 0.53
MSLN-207ENST00000566549 TYRP14679 529 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 EPB42P16452 691 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 RPIAP49247 311 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 OR4D2P58180 307 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 IMPG1Q17R60 797 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 CNPY1Q3B7I2 92 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 CYB5D2Q8WUJ1 264 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 PYCR2Q96C36 320 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 TMPRSS11EQ9UL52 423 aa18.34■□□□□ 0.53
MSLN-207ENST00000566549 AGAP14A8MT82 685 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 PLOD2O00469 737 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 POP4O95707 220 aaKnown RBP18.33■□□□□ 0.53
MSLN-207ENST00000566549 CLPTM1O96005 669 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 NTHL1P78549 312 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 SLC5A9Q2M3M2 681 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 SERPINA13PQ6UXR4 307 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 DNAJC14Q6Y2X3 702 aaPredicted RBP18.33■□□□□ 0.53
MSLN-207ENST00000566549 EPHX4Q8IUS5 362 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 VRK3Q8IV63 474 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 CHERPQ8IWX8 916 aaKnown RBP18.33■□□□□ 0.53
MSLN-207ENST00000566549 ANKFN1Q8N957 763 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 MCCC1Q96RQ3 725 aaPredicted RBP18.33■□□□□ 0.53
MSLN-207ENST00000566549 SLC2A11Q9BYW1 496 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 GRIP2Q9C0E4 1043 aa18.33■□□□□ 0.53
MSLN-207ENST00000566549 ANKRD28O15084 1053 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 HNRNPRO43390 633 aaKnown RBP18.33■□□□□ 0.52
MSLN-207ENST00000566549 RGS14O43566 566 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 BMP2P12643 396 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 DLEU7Q6UYE1 221 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 UBE2R2Q712K3 238 aaPredicted RBP18.33■□□□□ 0.52
MSLN-207ENST00000566549 HID1Q8IV36 788 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 SPDYE1Q8NFV5 336 aaPredicted RBP18.33■□□□□ 0.52
MSLN-207ENST00000566549 PPP3R2Q96LZ3 170 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 RPF2Q9H7B2 306 aaKnown RBP18.33■□□□□ 0.52
MSLN-207ENST00000566549 AGPAT4Q9NRZ5 378 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 PDE10AQ9Y233 779 aa18.33■□□□□ 0.52
MSLN-207ENST00000566549 SEC22BO75396 215 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 ANXA5P08758 320 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 FASP25445 335 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 SPINT3P49223 89 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 IRX1P78414 480 aaPredicted RBP18.32■□□□□ 0.52
MSLN-207ENST00000566549 LY6G5CQ5SRR4 150 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 ZNF648Q5T619 568 aaPredicted RBP18.32■□□□□ 0.52
MSLN-207ENST00000566549 TMEM215Q68D42 235 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 RGL4Q8IZJ4 473 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 AHI1Q8N157 1196 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 LIX1Q8N485 282 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 KRTCAP2Q8N6L1 136 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 BEND7Q8N7W2 519 aaPredicted RBP18.32■□□□□ 0.52
MSLN-207ENST00000566549 OR2A12Q8NGT7 310 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 ISG20Q96AZ6 181 aaKnown RBP18.32■□□□□ 0.52
MSLN-207ENST00000566549 ACTR8Q9H981 624 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 PAPOLBQ9NRJ5 636 aaKnown RBP18.32■□□□□ 0.52
MSLN-207ENST00000566549 OAZ3Q9UMX2 235 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 WNT6Q9Y6F9 365 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 TFAP2AP05549 437 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 OR56A5P0C7T3 313 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 HRH2P25021 359 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 VARSP26640 1264 aaKnown RBP18.32■□□□□ 0.52
MSLN-207ENST00000566549 GSTT1P30711 240 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 FAM174BQ3ZCQ3 159 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 ZNF697Q5TEC3 545 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 METTL25Q8N6Q8 603 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 IRF7Q92985 503 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 OSBPL11Q9BXB4 747 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 C11orf49Q9H6J7 331 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 TDP1Q9NUW8 608 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 MYO7AQ13402 2215 aa18.32■□□□□ 0.52
MSLN-207ENST00000566549 RNF103-CHMP3A0A140T963 221 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 TCRBV5S2A0A599 114 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 MANBAO00462 879 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 ENO2P09104 434 aaPredicted RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 EEFSECP57772 596 aaKnown RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 ZXDCQ2QGD7 858 aaPredicted RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 GDPD4Q6W3E5 623 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 ADIPOR2Q86V24 386 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 CGREF1Q99674 301 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 EIF3LQ9Y262 564 aaKnown RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 SCN8AQ9UQD0 1980 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 TTC34A8MYJ7 566 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 DFNA5O60443 496 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 EFCAB14O75071 495 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 MOSPD3O75425 235 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 RHOP08100 348 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 NEK2P51955 445 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 KRT80Q6KB66 452 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 PTRH1Q86Y79 214 aaKnown RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 ING5Q8WYH8 240 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 EMILIN2Q9BXX0 1053 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 CPEB1Q9BZB8 566 aaKnown RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 LRTM1Q9HBL6 345 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 SPHK2Q9NRA0 654 aa18.31■□□□□ 0.52
MSLN-207ENST00000566549 DUS2Q9NX74 493 aaKnown RBP18.31■□□□□ 0.52
MSLN-207ENST00000566549 PPIL1Q9Y3C6 166 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms