RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MTO1Q9Y2Z2 717 aaKnown RBP12.36□□□□□ -0.43
SF3B3-206ENST00000565990 FAM186AA6NE01 2351 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 EXOC1LA0A1B0GW35 172 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 SMIM23A6NLE4 172 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 C4orf47A7E2U8 309 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 TRIM38O00635 465 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 TM4SF5O14894 197 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 GFRA3O60609 400 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 NIPSNAP2O75323 286 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 ZWINTO95229 277 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 WISP3O95389 354 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-206ENST00000565990 EML2O95834 649 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 ANXA6P08133 673 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 ITGA2BP08514 1039 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 F3P13726 295 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 EZRP15311 586 aaKnown RBP12.35□□□□□ -0.43
SF3B3-206ENST00000565990 ACTR1BP42025 376 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 SLCO1A2P46721 670 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 LIMK2P53671 638 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 CDKN2DP55273 166 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 ACTR1AP61163 376 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 POU4F1Q01851 419 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 UAP1L1Q3KQV9 507 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 PLEKHS1Q5SXH7 462 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 FAM45BPQ6NSW5 357 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 UGT3A1Q6NUS8 523 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 CYHR1Q6ZMK1 362 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 OTOAQ7RTW8 1153 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 LILRA3Q8N6C8 439 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-206ENST00000565990 FAM46DQ8NEK8 389 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 OR4C6Q8NH72 309 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 UHMK1Q8TAS1 419 aaKnown RBP12.35□□□□□ -0.43
SF3B3-206ENST00000565990 FAM45AQ8TCE6 357 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 ELMO1Q92556 727 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 PAFAH2Q99487 392 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 NDNQ99608 321 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 OR52A5Q9H2C5 316 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 POPDC3Q9HBV1 291 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 PRDM8Q9NQV8 689 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 TXLNGQ9NUQ3 528 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 TAS2R13Q9NYV9 303 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 TXNDC16Q9P2K2 825 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 PSMC3IPQ9P2W1 217 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-206ENST00000565990 DNAJC16Q9Y2G8 782 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 WDR37Q9Y2I8 494 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 PCNX2A6NKB5 2137 aa12.35□□□□□ -0.43
SF3B3-206ENST00000565990 FAM95CA0A1B0GW59 222 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 OR5K4A6NMS3 321 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 TCP11X1B4DZS4 312 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 EIF3FO00303 357 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 FLRT2O43155 660 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 NOBOXO60393 691 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 CBFA2T3O75081 653 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 VPS26AO75436 327 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 DCTN3O75935 186 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 APOA4P06727 396 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 ITGB6P18564 788 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 XRCC1P18887 633 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 CNTFP26441 200 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 ACADLP28330 430 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 PDHA2P29803 388 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 ALDH3A1P30838 453 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 MSH2P43246 934 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 ABCG1P45844 678 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SERPINB9P50453 376 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 ELF3P78545 371 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 CLCA4Q14CN2 919 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 PDK4Q16654 411 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 DEFB133Q30KQ1 61 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 PLA2G4EQ3MJ16 856 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 AASDHQ4L235 1098 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SLC30A9Q6PML9 568 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 TMEM207Q6UWW9 146 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SLC22A15Q8IZD6 547 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 NAGSQ8N159 534 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SFRP1Q8N474 314 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 GPR156Q8NFN8 814 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 GIMAP7Q8NHV1 300 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 CD200R1Q8TD46 325 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 DENND1AQ8TEH3 1009 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 ZDHHC1Q8WTX9 485 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 PDLIM5Q96HC4 596 aaKnown RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 RAB3IPQ96QF0 476 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SMC6Q96SB8 1091 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 GPR21Q99679 349 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SLC30A3Q99726 388 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 OLFM1Q99784 485 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 TUBB6Q9BUF5 446 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 KCNK9Q9NPC2 374 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 SCHIP1Q9P0W5 487 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-206ENST00000565990 USH1CQ9Y6N9 552 aa12.34□□□□□ -0.43
SF3B3-206ENST00000565990 POC1B-GALNT4F8VUJ3 575 aa12.33□□□□□ -0.44
SF3B3-206ENST00000565990 TM9SF1O15321 606 aa12.33□□□□□ -0.44
SF3B3-206ENST00000565990 MATN4O95460 622 aa12.33□□□□□ -0.44
SF3B3-206ENST00000565990 CBSLP0DN79 551 aa12.33□□□□□ -0.44
SF3B3-206ENST00000565990 NQO1P15559 274 aaKnown RBP12.33□□□□□ -0.44
SF3B3-206ENST00000565990 TAC1P20366 129 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms