RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 IFT80Q9P2H3 777 aaPredicted RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 DHCR7Q9UBM7 475 aaKnown RBP7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 SEC14L3Q9UDX4 400 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 TINAGQ9UJW2 476 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF835Q9Y2P0 537 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 PCDHGB6Q9Y5F9 930 aa7.46□□□□□ -1.22
HERPUD1-206ENST00000563343 PHF3Q92576 2039 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 CSPG4Q6UVK1 2322 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 BTN3A3O00478 584 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 EPHB6O15197 1021 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 PRPSAP2O60256 369 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC19A2O60779 497 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 POP7O75817 140 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 ONECUT2O95948 504 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 HLA-DQB2P05538 268 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 HSP90AA1P07900 732 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 CD63P08962 238 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 PVRP15151 417 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 VCLP18206 1134 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 PSMA2P25787 234 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 PRDX3P30048 256 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SOX11P35716 441 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 TNFSF10P50591 281 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SMSP52788 366 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 DCDP81605 110 aaKnown RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 LTBQ06643 244 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 ITKQ08881 620 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 MAMLD1Q13495 774 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC9A5Q14940 896 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 NKAIN1Q4KMZ8 207 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 ATP13A5Q4VNC0 1218 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 DCUN1D2Q6PH85 259 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 TMCO3Q6UWJ1 677 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 Q6ZPB1 254 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 LINC00696Q6ZRV3 163 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 AMZ2Q86W34 360 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 MCOLN2Q8IZK6 566 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 RASGEF1AQ8N9B8 481 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 PROKR1Q8TCW9 393 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 NSMCE1Q8WV22 266 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 PSMF1Q92530 271 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 C12orf66Q96MD2 445 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 CSPG4P5Q96PW8 444 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 TRIB3Q96RU7 358 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SPSB2Q99619 263 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 MESP1Q9BRJ9 268 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 TUBGCP2Q9BSJ2 902 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 AP1M1Q9BXS5 423 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 TRIM7Q9C029 511 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SLC7A5P2Q9GIP4 190 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SPRTNQ9H040 489 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 NDOR1Q9UHB4 597 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 AMACRQ9UHK6 382 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 GPN3Q9UHW5 284 aaPredicted RBP7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 MEMO1Q9Y316 297 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 SCN2AQ99250 2005 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 JMJD1CQ15652 2540 aa7.45□□□□□ -1.22
HERPUD1-206ENST00000563343 ANKRD62A6NC57 917 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 KIAA1324LA8MWY0 1029 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 H3BRJ5 948 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 MATN2O00339 956 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 BTN3A1O00481 513 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 MATN3O15232 486 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 FANCGO15287 622 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 PIRTP0C851 137 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 FOSL1P15407 271 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 TCF4P15884 667 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 HLA-DPA1P20036 260 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 CES1P23141 567 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 KLK7P49862 253 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 XRCC4Q13426 336 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 ZIC1Q15915 447 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 TXNRD3NBQ6F5E7 133 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 FAAH2Q6GMR7 532 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 ARMC6Q6NXE6 501 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 COX15Q7KZN9 410 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 FAM20CQ8IXL6 584 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 OR11G2Q8NGC1 345 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 OR4E2Q8NGC2 313 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 DNAJB8Q8NHS0 232 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 HAS2Q92819 552 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 FATE1Q969F0 183 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 THOC3Q96J01 351 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 MAGEB10Q96LZ2 347 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 RMDN2Q96LZ7 410 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 REPIN1Q9BWE0 567 aaKnown RBP7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 KLHL25Q9H0H3 589 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 WWP1Q9H0M0 922 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 ZWILCHQ9H900 591 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 MAGEE1Q9HCI5 957 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 PLA2G3Q9NZ20 509 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 SHOC2Q9UQ13 582 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 ZNF711Q9Y462 761 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 DNMT3AQ9Y6K1 912 aaPredicted RBP7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 AP1M2Q9Y6Q5 423 aa7.44□□□□□ -1.22
HERPUD1-206ENST00000563343 TRAV17A0A0B4J275 112 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 TMEM191CA6NGB0 347 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 ADAM10O14672 748 aa7.43□□□□□ -1.22
HERPUD1-206ENST00000563343 AURKAO14965 403 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms