RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 MVB12BQ9H7P6 319 aa15.28■□□□□ 0.04
HERPUD1-205ENST00000562914 VPS37BQ9H9H4 285 aa15.28■□□□□ 0.04
HERPUD1-205ENST00000562914 ASF1BQ9NVP2 202 aa15.28■□□□□ 0.04
HERPUD1-205ENST00000562914 ZNF749O43361 778 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 KLF7O75840 302 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 ANXA9O76027 345 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 SRP72O76094 671 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 LCA5LO95447 670 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 TPM3P06753 285 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 GSTM1P09488 218 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 ST6GAL1P15907 406 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 ARCN1P48444 511 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 SOX8P57073 446 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 GSTM4Q03013 218 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 TAZQ16635 292 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 KYNUQ16719 465 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 PTCHD3Q3KNS1 767 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 PLEKHN1Q494U1 663 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 DCAF10Q5QP82 559 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 ZNF385CQ66K41 422 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 FBXO38Q6PIJ6 1188 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 ZNF567Q8N184 647 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 GALNT16Q8N428 558 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 ZADH2Q8N4Q0 377 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 PROKR1Q8TCW9 393 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 COG1Q8WTW3 980 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 P3H4Q92791 437 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 N4BP2L2Q92802 583 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 TCTN2Q96GX1 697 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 OXNAD1Q96HP4 312 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 PPM1MQ96MI6 270 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 BARD1Q99728 777 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 AGPAT4Q9NRZ5 378 aa15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 GPN3Q9UHW5 284 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 COPG1Q9Y678 874 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-205ENST00000562914 HIVEP3Q5T1R4 2406 aa15.27■□□□□ 0.03
HERPUD1-205ENST00000562914 HACD1B0YJ81 288 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 BUD23O43709 281 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 KRT86O43790 486 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 CST8O60676 142 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 POLBP06746 335 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 OTX2P32243 289 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 CA5AP35218 305 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 FOLR3P41439 243 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 CDKN2BP42772 138 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 GEMP55040 296 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 RPA4Q13156 261 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 ASTE1Q2TB18 679 aaPredicted RBP15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 FAM182AQ5T1J6 154 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 B4GALNT4Q76KP1 1039 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 HOOK3Q86VS8 718 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 AMIGO1Q86WK6 493 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 CISD2Q8N5K1 135 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 C19orf60Q96EN9 201 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 FERD3LQ96RJ6 166 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 FERMT1Q9BQL6 677 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 AP1M1Q9BXS5 423 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 ZNHIT6Q9NWK9 470 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 FAM8A1Q9UBU6 413 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 CRLS1Q9UJA2 301 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 SRPK3Q9UPE1 567 aa15.26■□□□□ 0.03
HERPUD1-205ENST00000562914 BTN3A1O00481 513 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 SGTAO43765 313 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 AKR1B10O60218 316 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 CRTAMO95727 393 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 LMAN1P49257 510 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 PER3P56645 1201 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 DCDP81605 110 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 GPR33Q49SQ1 333 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 TFDP3Q5H9I0 405 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 Q6ZS92 163 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 OR2Y1Q8NGV0 311 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 PTERQ96BW5 349 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 COPS8Q99627 209 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 ZNF552Q9H707 407 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 SAE1Q9UBE0 346 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 ARL5AQ9Y689 179 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 ITPR2Q14571 2701 aa15.25■□□□□ 0.03
HERPUD1-205ENST00000562914 CCDC66A2RUB6 948 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 GOLGA6L19H0YKK7 550 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 BTN3A3O00478 584 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 PSTPIP1O43586 416 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 OR2B3O76000 313 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 ATP1B2P14415 290 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 PECAM1P16284 738 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 ITGALP20701 1170 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 COL8A1P27658 744 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 RAPSNQ13702 412 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 TRIM14Q14142 442 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 TCEAL1Q15170 157 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 CRB2Q5IJ48 1285 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 FAM69BQ5VUD6 431 aa15.24■□□□□ 0.03
HERPUD1-205ENST00000562914 MLIPQ5VWP3 458 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms