RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 DAG1Q14118 895 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZMYND11Q15326 602 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 FAM174BQ3ZCQ3 159 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 ATAD1Q8NBU5 361 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 KAT2AQ92830 837 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 CNDP2Q96KP4 475 aaKnown RBP13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 MYOCQ99972 504 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 POLR2J3Q9H1A7 115 aaKnown RBP13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 TBC1D17Q9HA65 648 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZDHHC4Q9NPG8 344 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 CPSF4LA6NMK7 179 aaKnown RBP13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 EFCAB9A8MZ26 197 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 PRKD3O94806 890 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZNF823P16415 610 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 RBM34P42696 430 aaKnown RBP13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 MERTKQ12866 999 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 CBLBQ13191 982 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZNF613Q6PF04 617 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
CSPG4P11-201ENST00000560634 DUXAA6NLW8 204 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 hCG_2039718K7EN88 272 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 VARSP26640 1264 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 NMBRP28336 390 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 GNALP38405 381 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 KHKP50053 298 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SP3Q02447 781 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 RALGPS1Q5JS13 557 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 THOC7Q6I9Y2 204 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 CFAP206Q8IYR0 622 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SPATA22Q8NHS9 363 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 GPR152Q8TDT2 470 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 TAMM41Q96BW9 452 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLC35G5Q96KT7 338 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 C12orf66Q96MD2 445 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 GFM1Q96RP9 751 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 EIF2B4Q9UI10 523 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 STXBP5LQ9Y2K9 1186 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 AKAP8O43823 692 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 FESP07332 822 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 ARL2P36404 184 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 PIK3CBP42338 1070 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 RPL26P61254 145 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 FKBP1BP68106 108 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZNF234Q14588 700 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 TAF1AQ15573 450 aaPredicted RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLC9B1Q4ZJI4 515 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 LDB1Q86U70 411 aaPredicted RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 CCDC54Q8NEL0 328 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZNF514Q96K75 400 aaPredicted RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 DUSP26Q9BV47 211 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 EBF3Q9H4W6 596 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SYN3O14994 580 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SNHG28P0DPA3 235 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 MASP1P48740 699 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 CRISP3P54108 245 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 TPTEP56180 551 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLC22A4Q9H015 551 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 C12orf65Q9H3J6 166 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 PLK2Q9NYY3 685 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 UBXN7O94888 489 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 CCNFP41002 786 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 SLC18A1P54219 525 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 ATXN1P54253 815 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 EIF5AL1Q6IS14 154 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 ERI1Q8IV48 349 aaKnown RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 OR2L5Q8NG80 312 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 OR10H4Q8NGA5 316 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 CCDC107Q8WV48 283 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 RRAGCQ9HB90 399 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 TVP23BQ9NYZ1 205 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 GRHL1Q9NZI5 618 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 STOX2Q9P2F5 926 aaPredicted RBP13□□□□□ -0.33
CSPG4P11-201ENST00000560634 ZNF639Q9UID6 485 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 PCDHGB1Q9Y5G3 927 aa13□□□□□ -0.33
CSPG4P11-201ENST00000560634 CASZ1Q86V15 1759 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 DAPL1A0PJW8 107 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 OR1F1O43749 312 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 SRPRAP08240 638 aaKnown RBP12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 IL7RP16871 459 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 PRPS1L1P21108 318 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 RBM20Q5T481 1227 aaKnown RBP12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 TCEAL6Q6IPX3 200 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 PYHIN1Q6K0P9 492 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 CERS5Q8N5B7 392 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 NAT16Q8N8M0 369 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 DCBLD1Q8N8Z6 715 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 MIPEPQ99797 713 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 HEPHQ9BQS7 1158 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 ABCG4Q9H172 646 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 K7EPI3 171 aa12.99□□□□□ -0.33
CSPG4P11-201ENST00000560634 TBX1O43435 398 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms