RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 FGF5P12034 268 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 AOAHP28039 575 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 CCR7P32248 378 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 PREPP48147 710 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 VPS41P49754 854 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 GNG11P61952 73 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 MAP7Q14244 749 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 SOWAHCQ53LP3 525 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 RNASEH2BQ5TBB1 312 aaKnown RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 LDB1Q86U70 411 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 LRRC6Q86X45 466 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 SLC22A15Q8IZD6 547 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 AGGF1Q8N302 714 aaeCLIP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 D2HGDHQ8N465 521 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 PHC3Q8NDX5 983 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 ASZ1Q8WWH4 475 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 ELMO1Q92556 727 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 WBP1Q96G27 269 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 BIRC8Q96P09 236 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 FCRL4Q96PJ5 515 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 FERD3LQ96RJ6 166 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 MAP3K3Q99759 626 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 LATS2Q9NRM7 1088 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
SMAD3-213ENST00000560175 RNF14Q9UBS8 474 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 FAM8A1Q9UBU6 413 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 KLHL3Q9UH77 587 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 SAR1BQ9Y6B6 198 aa12.85□□□□□ -0.35
SMAD3-213ENST00000560175 SEC16AO15027 2179 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 ZCWPW2A0A1B0GU75 182 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 DLGAP3O95886 979 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 MSL3P1P0C860 447 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 SPTBP11277 2137 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 KPNA2P52292 529 aaKnown RBP12.84□□□□□ -0.35
SMAD3-213ENST00000560175 CXADRP78310 365 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 CBLBQ13191 982 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 PTK6Q13882 451 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 GBX1Q14549 363 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 ANKRD20A4Q4UJ75 823 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 PCSK4Q6UW60 755 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 CES3Q6UWW8 571 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 TIPARPQ7Z3E1 657 aaKnown RBP12.84□□□□□ -0.35
SMAD3-213ENST00000560175 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 PPIL6Q8IXY8 311 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 ADGRF3Q8IZF5 1079 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 OR4E2Q8NGC2 313 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 OR52E1Q8NGJ3 308 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 OR5K2Q8NHB8 316 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 LKAAEAR1Q8TD35 194 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-213ENST00000560175 BBC3Q96PG8 261 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-213ENST00000560175 NAPGQ99747 312 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-213ENST00000560175 PITPNM3Q9BZ71 974 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 C1GALT1Q9NS00 363 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 POMT2Q9UKY4 750 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 BTRCQ9Y297 605 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 PCDHB11Q9Y5F2 797 aa12.84□□□□□ -0.35
SMAD3-213ENST00000560175 SNRNP200O75643 2136 aaKnown RBP12.83□□□□□ -0.35
SMAD3-213ENST00000560175 IQCF5A8MTL0 148 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 TK2O00142 265 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 BTN3A3O00478 584 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 DNALI1O14645 258 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 USP1O94782 785 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 S1PR4O95977 384 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 WT1P19544 449 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 OGNP20774 298 aaKnown RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 MAP4P27816 1152 aaKnown RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 PRDX3P30048 256 aaKnown RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 PPM1FP49593 454 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 SEPHS1P49903 392 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 SH3BP2P78314 561 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 RHDQ02161 417 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 KRT33BQ14525 404 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 DNAJC21Q5F1R6 531 aaKnown RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 DNTTIP2Q5QJE6 756 aaKnown RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 MRNIPQ6NTE8 343 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 CCDC81Q6ZN84 652 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 SYDE1Q6ZW31 735 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 CENPUQ71F23 418 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 PCGF5Q86SE9 256 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 HOOK3Q86VS8 718 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 CILP2Q8IUL8 1156 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 VRK3Q8IV63 474 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 LCN9Q8WX39 176 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 TTC9Q92623 222 aa12.83□□□□□ -0.36
SMAD3-213ENST00000560175 UBL7Q96S82 380 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-213ENST00000560175 MENTQ9BUN1 341 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms