RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 AHSGP02765 367 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 APOA4P06727 396 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 HOXB3P14651 431 aaPredicted RBP16.41■□□□□ 0.22
RPL28-209ENST00000560055 NDUFS1P28331 727 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 CARSP49589 748 aaKnown RBP16.41■□□□□ 0.22
RPL28-209ENST00000560055 CLCN7P51798 805 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 HSPA14Q0VDF9 509 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 WDR74Q6RFH5 385 aaPredicted RBP16.41■□□□□ 0.22
RPL28-209ENST00000560055 PIM3Q86V86 326 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 KDF1Q8NAX2 398 aaPredicted RBP16.41■□□□□ 0.22
RPL28-209ENST00000560055 OR4D9Q8NGE8 314 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 TFGQ92734 400 aaPredicted RBP16.41■□□□□ 0.22
RPL28-209ENST00000560055 KCNJ9Q92806 393 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 TMEM74Q96NL1 305 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 DPYSL5Q9BPU6 564 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 PDP2Q9P2J9 529 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 KLHL42Q9P2K6 505 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 GALPQ9UBC7 116 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 SLC24A2Q9UI40 661 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 COMMD10Q9Y6G5 202 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 COLEC10Q9Y6Z7 277 aa16.41■□□□□ 0.22
RPL28-209ENST00000560055 DSPP15924 2871 aaKnown RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 A0A1W2PNU3 283 aaPredicted RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 C1QAP02745 245 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 GSTA2P09210 222 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 SSTR1P30872 391 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 MAGEA4P43358 317 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 CSE1LP55060 971 aaKnown RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 INHBCP55103 352 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 GPX6P59796 221 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 MGAT5Q09328 741 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 TMED2Q15363 201 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 PLEKHS1Q5SXH7 462 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 TMEM71Q6P5X7 295 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 CYS1Q717R9 158 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 OTOAQ7RTW8 1153 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 ATXN7L3BQ96GX2 97 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 LIN37Q96GY3 246 aaPredicted RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 AHCYL2Q96HN2 611 aaKnown RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 AARSD1Q9BTE6 412 aaKnown RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 SEMA6CQ9H3T2 930 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 MVB12BQ9H7P6 319 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 PPANQ9NQ55 473 aaKnown RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 TMEM9Q9P0T7 183 aa16.4■□□□□ 0.22
RPL28-209ENST00000560055 RALYQ9UKM9 306 aaKnown RBP16.4■□□□□ 0.22
RPL28-209ENST00000560055 IGHV5-10-1A0A0J9YXX1 117 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 TMX2-CTNND1H3BSU7 103 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 THRAP10827 490 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 CHRM3P20309 590 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 ATP5DP30049 168 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 CAPZBP47756 277 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 LIMK2P53671 638 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 TIAL1Q01085 375 aaKnown RBP eCLIP16.39■□□□□ 0.21
RPL28-209ENST00000560055 CCDC25Q86WR0 208 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 RELL1Q8IUW5 271 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 PALM2Q8IXS6 379 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 PHC3Q8NDX5 983 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 GIMAP7Q8NHV1 300 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 RSC1A1Q92681 617 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 FAM136AQ96C01 138 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 C9orf72Q96LT7 481 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 SLC30A3Q99726 388 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 MCMBPQ9BTE3 642 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 NRSN2Q9GZP1 204 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 LRRC4CQ9HCJ2 640 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 SMYD2Q9NRG4 433 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 PSAT1Q9Y617 370 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 MN1Q10571 1320 aaPredicted RBP16.39■□□□□ 0.21
RPL28-209ENST00000560055 PKD1L2Q7Z442 2459 aa16.39■□□□□ 0.21
RPL28-209ENST00000560055 ANKRD11Q6UB99 2663 aaPredicted RBP16.38■□□□□ 0.21
RPL28-209ENST00000560055 TCRBV9S1A1TA0A576 114 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 TRABD2BA6NFA1 517 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 E5RI56 91 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 C9P02748 559 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 TYRP1P17643 537 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 MAPK9P45984 424 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 TRA2AQ13595 282 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPL28-209ENST00000560055 RTP5Q14D33 572 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 KIF26BQ2KJY2 2108 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 CAPN12Q6ZSI9 719 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 C3orf62Q6ZUJ4 267 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 SLC26A11Q86WA9 606 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 TBC1D21Q8IYX1 336 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 ZBTB2Q8N680 514 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 OR5AR1Q8NGP9 310 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 OR5K2Q8NHB8 316 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 JPH3Q8WXH2 748 aaPredicted RBP16.38■□□□□ 0.21
RPL28-209ENST00000560055 NCSTNQ92542 709 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 FERD3LQ96RJ6 166 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 RAB33BQ9H082 229 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 CCDC68Q9H2F9 335 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 TFB2MQ9H5Q4 396 aaKnown RBP16.38■□□□□ 0.21
RPL28-209ENST00000560055 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 EPHA6Q9UF33 1036 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 CORO1CQ9ULV4 474 aaPredicted RBP16.38■□□□□ 0.21
RPL28-209ENST00000560055 ASF1AQ9Y294 204 aa16.38■□□□□ 0.21
RPL28-209ENST00000560055 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
RPL28-209ENST00000560055 FAM159BA6NKW6 160 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms