RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RAB12Q6IQ22 244 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 DUS1LQ6P1R4 473 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 ABRAXAS1Q6UWZ7 409 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ZNF852Q6ZMS4 543 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 LINC00696Q6ZRV3 163 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ASB18Q6ZVZ8 466 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 NUP54Q7Z3B4 507 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 TUSC5Q8IXB3 177 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 HACE1Q8IYU2 909 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MCUQ8NE86 351 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 CSNK2A3Q8NEV1 391 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 OR2AK2Q8NG84 335 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MRPS27Q92552 414 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 ATP6V0A1Q93050 837 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MR1Q95460 341 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 PIGTQ969N2 578 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 HDAC11Q96DB2 347 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ARHGEF26Q96DR7 871 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ARSGQ96EG1 525 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ERO1AQ96HE7 468 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 ATP6V0BQ99437 205 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 PAFAH2Q99487 392 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MLPHQ9BV36 600 aaPredicted RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 RBM4Q9BWF3 364 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 BARHL1Q9BZE3 327 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 TSPY26PQ9H489 355 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 PLK3Q9H4B4 646 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MID1IP1Q9NPA3 183 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 SCRT2Q9NQ03 307 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 GDE1Q9NZC3 331 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 FAF1Q9UNN5 650 aaPredicted RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 EXO1Q9UQ84 846 aaKnown RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 DLGAP4Q9Y2H0 992 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 MTF2Q9Y483 593 aaPredicted RBP3.56□□□□□ -1.84
SPG11-218ENST00000559754 ATP6V0A2Q9Y487 856 aa3.56□□□□□ -1.84
SPG11-218ENST00000559754 LOC102723996A0A087X1L8 192 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 ARHGEF37A1IGU5 675 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 LRRC72A6NJI9 287 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 CCDC188H7C350 402 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 SPINT2O43291 252 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 KINO60870 393 aaKnown RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 APOHP02749 345 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 ACTN1P12814 892 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 PAX1P15863 534 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 CCR10P46092 362 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 AMPHP49418 695 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 NPY4RP50391 375 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 RAB28P51157 221 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 BMXP51813 675 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 GALCP54803 685 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TFAP4Q01664 338 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 C17orf67Q0P5P2 114 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TUBB2AQ13885 445 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 FGFBP1Q14512 234 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 IL11RAQ14626 422 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TNIP1Q15025 636 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TMEM35AQ53FP2 167 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 SOWAHCQ53LP3 525 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 ZRANB3Q5FWF4 1079 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 GLRA4Q5JXX5 417 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 SIGIRRQ6IA17 410 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 BRAT1Q6PJG6 821 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 PQLC2Q6ZP29 291 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 CFAP77Q6ZQR2 320 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 QSOX2Q6ZRP7 698 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 CACNA2D4Q7Z3S7 1137 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 ADCK2Q7Z695 626 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 PCDH20Q8N6Y1 951 aaKnown RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 PI4KAP1Q8N8J0 262 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TC2NQ8N9U0 490 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 THAP6Q8TBB0 222 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 PTPMT1Q8WUK0 201 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 KCNE4Q8WWG9 221 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TAF4BQ92750 862 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 ZKSCAN4Q969J2 545 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 PTERQ96BW5 349 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 ZNF501Q96CX3 271 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 ORAI1Q96D31 301 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 AK8Q96MA6 479 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TMEM68Q96MH6 324 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 F2RL3Q96RI0 385 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TUBB2BQ9BVA1 445 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 NUP85Q9BW27 656 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 TKTL2Q9H0I9 626 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 ZNF696Q9H7X3 374 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 RANGRFQ9HD47 186 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 IL1RAPL2Q9NP60 686 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 SLC6A13Q9NSD5 602 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 SETD4Q9NVD3 440 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 HPF1Q9NWY4 346 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 LEF1Q9UJU2 399 aaPredicted RBP3.55□□□□□ -1.84
SPG11-218ENST00000559754 OR2W1Q9Y3N9 320 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 CEPT1Q9Y6K0 416 aa3.55□□□□□ -1.84
SPG11-218ENST00000559754 SPAG9O60271 1321 aaKnown RBP3.54□□□□□ -1.84
SPG11-218ENST00000559754 PTPRCP08575 1304 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 IGSF1Q8N6C5 1336 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 GPR75-ASB3A0A0A6YYF3 556 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 LRRD1A4D1F6 860 aa3.54□□□□□ -1.84
SPG11-218ENST00000559754 A4D1N5 150 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms