RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 USP53Q70EK8 1073 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 REXO1L1PQ8IX06 675 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 OR52K1Q8NGK4 314 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 WDR36Q8NI36 951 aaKnown RBP5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF398Q8TD17 642 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 FGF11Q92914 225 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 SLC46A1Q96NT5 459 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 C19orf43Q9BQ61 176 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ASB8Q9H765 288 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 SARS2Q9NP81 518 aaKnown RBP5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 TMEM9Q9P0T7 183 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 ADAM30Q9UKF2 790 aa5.91□□□□□ -1.46
CTDSPL2-204ENST00000558966 KALRNO60229 2985 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 TRBV5-4A0A0C4DH59 114 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 KIR2DS5A0A0G2JLQ3 304 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PRAMEF33A0A0G2JMD5 474 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 A0A0G2JNG1 304 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 IGHV5-10-1A0A0J9YXX1 117 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC78A2IDD5 438 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 MROH6A6NGR9 719 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 LILRA5A6NI73 299 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 OR2AG2A6NM03 316 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 OR5K4A6NMS3 321 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ERI2A8K979 691 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PDZK1P1A8MUH7 402 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 H7C0S8 307 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 KIR2DS3K7RE56 304 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 AGRPO00253 132 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PDPK1O15530 556 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PSMD3O43242 534 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 POP7O75817 140 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 SUN1O94901 812 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ALX3O95076 343 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 SLC2A4P14672 509 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ITIH1P19827 911 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PSMA3P25788 255 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 RPL10P27635 214 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ITPKBP27987 946 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 AKT1P31749 480 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 MC4RP32245 332 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 RPL22P35268 128 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 FDFT1P37268 417 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 HADHAP40939 763 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ETV5P41161 510 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 KCNJ1P48048 391 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CDKN1CP49918 316 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 LIMK2P53671 638 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 DRG2P55039 364 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ERVPABLB-1P60509 514 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PDE1BQ01064 536 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 DMPKQ09013 629 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 KIR2DS5Q14953 304 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 C16orf72Q14CZ0 275 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 SEPT7Q16181 437 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CLPPQ16740 277 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 LONRF2Q1L5Z9 754 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC38Q502W7 563 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 TMEM220Q6QAJ8 160 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 C19orf48Q6RUI8 117 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 WASH2PQ6VEQ5 465 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 FAM83HQ6ZRV2 1179 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 DET1Q7L5Y6 550 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 RAB11FIP2Q7L804 512 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CLEC14AQ86T13 490 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 SLC9B2Q86UD5 537 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PIM3Q86V86 326 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 LSMEM2Q8N112 164 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 NXPE1Q8N323 547 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 BEND7Q8N7W2 519 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PRELID2Q8N945 189 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CCDC89Q8N998 374 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 LRRC45Q96CN5 670 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 SGF29Q96ES7 293 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PDLIM2Q96JY6 352 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF578Q96N58 590 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 TTC25Q96NG3 672 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 SLC38A3Q99624 504 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 STRADBQ9C0K7 418 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 FAM96AQ9H5X1 160 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 WASH6PQ9NQA3 447 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 NLE1Q9NVX2 485 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 PAK5Q9P286 719 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZNF624Q9P2J8 865 aaPredicted RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CPNE7Q9UBL6 633 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 CRLS1Q9UJA2 301 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 MKL2Q9ULH7 1088 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 DRG1Q9Y295 367 aaKnown RBP5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 WDR37Q9Y2I8 494 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ZKSCAN5Q9Y2L8 839 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 LOXL2Q9Y4K0 774 aa5.9□□□□□ -1.46
CTDSPL2-204ENST00000558966 ATRXP46100 2492 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 IGLV3-16A0A075B6K0 115 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR51F1A6NGY5 319 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 OR52A4PA6NMU1 304 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 TMX2-CTNND1H3BSU7 103 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 DUX1O43812 170 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 TNFSF15O95150 251 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 ITGA2BP08514 1039 aa5.9□□□□□ -1.47
CTDSPL2-204ENST00000558966 THRAP10827 490 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms