RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ACADLP28330 430 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 GCAP28676 217 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 ATP5DP30049 168 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 CBSP35520 551 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 DNAJC3Q13217 504 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 LGSNQ5TDP6 509 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 GUSBP11Q6P575 273 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 RAPH1Q70E73 1250 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 AVL9Q8NBF6 648 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 PHC3Q8NDX5 983 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 OR2W6PQ8NHA6 318 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 BAHD1Q8TBE0 780 aaPredicted RBP20.76■□□□□ 0.91
CASC4-204ENST00000557945 EEF1AKMT1Q8WVE0 214 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 LINGO1Q96FE5 620 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 GPAMQ9HCL2 828 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 POT1Q9NUX5 634 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 LRIT1Q9P2V4 623 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 FETUBQ9UGM5 382 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 RUVBL2Q9Y230 463 aaKnown RBP20.76■□□□□ 0.91
CASC4-204ENST00000557945 HEBP2Q9Y5Z4 205 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 PIEZO1Q92508 2521 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 PRAMEF33A0A0G2JMD5 474 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 HMX2A2RU54 273 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 PHGDHO43175 533 aaKnown RBP20.75■□□□□ 0.91
CASC4-204ENST00000557945 TNFSF14O43557 240 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 NUDT17P0C025 328 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 GLB1P16278 677 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 CNTFP26441 200 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 SLCO1A2P46721 670 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 IL2P60568 153 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 RAB10P61026 200 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 UBE2IP63279 158 aaKnown RBP20.75■□□□□ 0.91
CASC4-204ENST00000557945 ADGRD1Q6QNK2 874 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 EFL1Q7Z2Z2 1120 aaKnown RBP20.75■□□□□ 0.91
CASC4-204ENST00000557945 CMC1Q7Z7K0 106 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 OR6C4Q8NGE1 309 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 NAT6Q93015 286 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 FOPNLQ96NB1 174 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 POPDC3Q9HBV1 291 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 SYTL2Q9HCH5 934 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 PSMC3IPQ9P2W1 217 aaPredicted RBP20.75■□□□□ 0.91
CASC4-204ENST00000557945 COLEC10Q9Y6Z7 277 aa20.75■□□□□ 0.91
CASC4-204ENST00000557945 EME2A4GXA9 379 aaPredicted RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 PPM1DO15297 605 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 NUDT21O43809 227 aaKnown RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 KRT37O76014 449 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 CSRP1P21291 193 aaKnown RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 SDHBP21912 280 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 FASLGP48023 281 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 TRIP6Q15654 476 aaKnown RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 CCDC157Q569K6 752 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 TMEM207Q6UWW9 146 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 PIWIL4Q7Z3Z4 852 aaKnown RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 ZNF761Q86XN6 746 aaPredicted RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 MYO1HQ8N1T3 1032 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 IFI44Q8TCB0 444 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 EPS8L3Q8TE67 593 aaKnown RBP20.74■□□□□ 0.91
CASC4-204ENST00000557945 CCDC74AQ96AQ1 378 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 SH3KBP1Q96B97 665 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 SLC38A3Q99624 504 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 PPCSQ9HAB8 311 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 TBK1Q9UHD2 729 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 PLAAQ9Y263 795 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 NFS1Q9Y697 457 aa20.74■□□□□ 0.91
CASC4-204ENST00000557945 TLDC2A0PJX2 215 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 TRIM49D1C9J1S8 452 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 EIF3FO00303 357 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 TM4SF5O14894 197 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 SNRPAP09012 282 aaKnown RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 MPC1LP0DKB6 136 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 ZNF37AP17032 561 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 NDUFS1P28331 727 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 CRABP2P29373 138 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 SERPINB8P50452 374 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 PRKG2Q13237 762 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 ZKSCAN8Q15776 578 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 BEND6Q5SZJ8 279 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 LRRC8EQ6NSJ5 796 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 UNC5DQ6UXZ4 953 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 NEK10Q6ZWH5 1172 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 NKAPQ8N5F7 415 aaKnown RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 Q8N9G6 341 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 OR5AR1Q8NGP9 310 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 HNRNPLLQ8WVV9 542 aaKnown RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 HGH1Q9BTY7 390 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 TRIT1Q9H3H1 467 aaKnown RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 MVB12BQ9H7P6 319 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 SLC40A1Q9NP59 571 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 SNX15Q9NRS6 342 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 ARGLU1Q9NWB6 273 aaPredicted RBP20.73■□□□□ 0.91
CASC4-204ENST00000557945 CTNNAL1Q9UBT7 734 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 CEP250Q9BV73 2442 aa20.73■□□□□ 0.91
CASC4-204ENST00000557945 IQANK1A0A1B0GTG1 560 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 RPN2P04844 631 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 TYK2P29597 1187 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 PPM1FP49593 454 aaPredicted RBP20.72■□□□□ 0.91
CASC4-204ENST00000557945 PERM1Q5SV97 790 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 CYHR1Q6ZMK1 362 aa20.72■□□□□ 0.91
CASC4-204ENST00000557945 RBM12BQ8IXT5 1001 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms