RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CXCR6O00574 342 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 WDR47O94967 919 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 CHRNA1P02708 482 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 JUNDP17535 347 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 DCTP40126 519 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 PTGER3P43115 390 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 MAGEA11P43364 429 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 GP2P55259 537 aaKnown RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 EFEMP1Q12805 493 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 MAP2K5Q13163 448 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 MAPKAPK3Q16644 382 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 CTU2Q2VPK5 515 aaKnown RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 PAN2Q504Q3 1202 aaKnown RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 AGAP7PQ5VUJ5 663 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 MICU2Q8IYU8 434 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 ARL10Q8N8L6 244 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 PHF10Q8WUB8 498 aaKnown RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 RORBQ92753 470 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 GTF2H4Q92759 462 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 PSKH2Q96QS6 385 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 THUMPD3Q9BV44 507 aaKnown RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 GABARAPL1Q9H0R8 117 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 CCNB1IP1Q9NPC3 277 aa16.01■□□□□ 0.15
SHMT2-232ENST00000557487 DCAF13Q9NV06 445 aaKnown RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.01■□□□□ 0.15
SHMT2-232ENST00000557487 TRIM43BA6NCK2 446 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 H7C0S8 307 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 M0R3G1 203 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 ARHGEF15O94989 841 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 POMCP01189 267 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 ACVRL1P37023 503 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 HPCAL1P37235 193 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 DPY19L1Q2PZI1 675 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 C5orf22Q49AR2 442 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SLC39A12Q504Y0 691 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SPESP1Q6UW49 350 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 ENPP6Q6UWR7 440 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 GOLGA7Q7Z5G4 137 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SLCO6A1Q86UG4 719 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SVOPQ8N4V2 548 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SIDT2Q8NBJ9 832 aaKnown RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 SLAIN1Q8ND83 568 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 OR52B6Q8NGF0 335 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 FBXO30Q8TB52 745 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 EEF1AKMT1Q8WVE0 214 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 REXO5Q96IC2 774 aaKnown RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 DGCR6LQ9BY27 220 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 VAPAQ9P0L0 249 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 POLR3HQ9Y535 204 aaPredicted RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 SPO11Q9Y5K1 396 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 MAGED1Q9Y5V3 778 aaPredicted RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 A0A0U1RQF3 1178 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 E5RI56 91 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 INPPL1O15357 1258 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 HS6ST1O60243 411 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 DFNA5O60443 496 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 PRKD3O94806 890 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 OAZ2O95190 189 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 PIRTP0C851 137 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 ACVR2AP27037 513 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 GRK4P32298 578 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 PIGAP37287 484 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 CDK5R2Q13319 367 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 GTF2H2Q13888 395 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 KEAP1Q14145 624 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 RUNDC3AQ59EK9 446 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 CTSL3PQ5NE16 218 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 CACHD1Q5VU97 1274 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 LAIR2Q6ISS4 152 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 GTF2H2CQ6P1K8 395 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 PRSS48Q7RTY5 328 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 DCP2Q8IU60 420 aaKnown RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 FAM9CQ8IZT9 166 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SCAIQ8N9R8 606 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 OR10A6Q8NH74 314 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 FAR1Q8WVX9 515 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 EFHD2Q96C19 240 aaPredicted RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 RMDN1Q96DB5 314 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 EPS8L2Q9H6S3 715 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 CARS2Q9HA77 564 aaKnown RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 SCN3BQ9NY72 215 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 ABI2Q9NYB9 513 aaPredicted RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 SCHIP1Q9P0W5 487 aaPredicted RBP16■□□□□ 0.15
SHMT2-232ENST00000557487 PCDHB1Q9Y5F3 818 aa16■□□□□ 0.15
SHMT2-232ENST00000557487 BCKDKO14874 412 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 RAD51BO15315 384 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 INSIG1O15503 277 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 ERN1O75460 977 aaKnown RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 E2F6O75461 281 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 PRSS56P0CW18 603 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 MAGEA10P43363 369 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 EIF2B2P49770 351 aaKnown RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 HNRNPFP52597 415 aaKnown RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 DGKQP52824 942 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 BEX3Q00994 111 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 CCDC92Q53HC0 331 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 FBXO48Q5FWF7 155 aa15.99■□□□□ 0.15
SHMT2-232ENST00000557487 SYT6Q5T7P8 510 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-232ENST00000557487 SHQ1Q6PI26 577 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms