RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	TNKS2	Q9H2K2	1166 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	MARCH7	Q9H992	704 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CSNK1G1	Q9HCP0	422 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	TNFRSF12A	Q9NP84	129 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	IKZF3	Q9UKT9	509 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	SH3GLB1	Q9Y371	365 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	LRRC37A2	A6NM11	1700 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	SLC38A8	A6NNN8	435 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	PIP5K1B	O14986	540 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	IDH3B	O43837	385 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CCL5	P13501	91 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	GGT5	P36269	586 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	ACVRL1	P37023	503 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CDKN2D	P55273	166 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	RHAG	Q02094	409 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	TAB1	Q15750	504 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	ZNF678	Q5SXM1	525 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	TXNDC8	Q6A555	127 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	SLCO6A1	Q86UG4	719 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	COMMD2	Q86X83	199 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	STON2	Q8WXE9	905 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	PROX1	Q92786	737 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	ROPN1L	Q96C74	230 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	SMOC2	Q9H3U7	446 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	NMUR1	Q9HB89	426 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	TBC1D30	Q9Y2I9	924 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	MRPS23	Q9Y3D9	190 aa	Known RBP	12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CPQ	Q9Y646	472 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	BBIP1	A8MTZ0	92 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	UBXN8	O00124	270 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	SYN3	O14994	580 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CD3EAP	O15446	510 aa	Known RBP	12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CACNG3	O60359	315 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	NCK1	P16333	377 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	CDH15	P55291	814 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	HERVK_113	P63132	956 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	TMEM214	Q6NUQ4	689 aa	Known RBP	12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	RNF44	Q7L0R7	432 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	MCFD2	Q8NI22	146 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	ASB2	Q96Q27	587 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	HOPX	Q9BPY8	73 aa	Predicted RBP	12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	ERVK-6	Q9BXR3	956 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	GSTO2	Q9H4Y5	243 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	EVL	Q9UI08	416 aa	Predicted RBP	12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	PTGDR2	Q9Y5Y4	395 aa		12.1	□□□□□ -0.47
TMPO-212	ENST00000556029	AXIN1	O15169	862 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	RGS14	O43566	566 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	PABPC1	P11940	636 aa	Known RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	RHOQ	P17081	205 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	CHSY3	Q70JA7	882 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	BHLHA9	Q7RTU4	235 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	TICAM1	Q8IUC6	712 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	TERB1	Q8NA31	727 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	OCEL1	Q9H607	264 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ENPP3	O14638	875 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	HTRA2	O43464	458 aa	Predicted RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ACSL4	O60488	711 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ATP6V1G1	O75348	118 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	FADS2	O95864	444 aa	Known RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ADH1A	P07327	375 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ARSD	P51689	593 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	MLLT6	P55198	1093 aa	Predicted RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	TSN	Q15631	228 aa	Known RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	FAM219B	Q5XKK7	198 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	FAM151B	Q6UXP7	276 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	MYOC	Q99972	504 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	FCF1	Q9Y324	198 aa	Known RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	PLXNA1	Q9UIW2	1896 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	TRAV19	A0A0A6YYK7	116 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029		H0Y858	1186 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	KCNH1	O95259	989 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	GNA12	Q03113	381 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	MXD1	Q05195	221 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	UNC50	Q53HI1	259 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	SIRPB2	Q5JXA9	342 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	GALNT18	Q6P9A2	607 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	MTSS1L	Q765P7	747 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	OOSP2	Q86WS3	158 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	IMP4	Q96G21	291 aa	Known RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	ZNF597	Q96LX8	424 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	OR52E6	Q96RD3	313 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	MFSD1	Q9H3U5	465 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	TIMMDC1	Q9NPL8	285 aa		12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	GMPR2	Q9P2T1	348 aa	Known RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.09	□□□□□ -0.47
TMPO-212	ENST00000556029	NEDD8-MDP1	E9PL57	170 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	PDLIM1	O00151	329 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	GOT2	P00505	430 aa	Known RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	EIF2S1	P05198	315 aa	Known RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	TNNI3	P19429	210 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	VEGFB	P49765	207 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	PTPN5	P54829	565 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ABR	Q12979	859 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	PTPRCAP	Q14761	206 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	KDELC1	Q6UW63	502 aa		12.08	□□□□□ -0.48
TMPO-212	ENST00000556029	CHERP	Q8IWX8	916 aa	Known RBP	12.08	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms