RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BMPR2Q13873 1038 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 SEMA3AQ14563 771 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ELOCQ15369 112 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TBCCQ15814 346 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ANKRD20A4Q4UJ75 823 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 PYCR3Q53H96 274 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 WASHC2DQ5SRD0 308 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 MROH9Q5TGP6 573 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ARMC3Q5W041 872 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TMEM220Q6QAJ8 160 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TMEM135Q86UB9 458 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 CRLF3Q8IUI8 442 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 SFTPA2Q8IWL1 248 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 UNC5BQ8IZJ1 945 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 NXPE1Q8N323 547 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 RASGEF1AQ8N9B8 481 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 FAM46DQ8NEK8 389 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ARMC2Q8NEN0 867 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ULK4Q96C45 1275 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 THOC1Q96FV9 657 aaKnown RBP9.69□□□□□ -0.86
PSEN1-213ENST00000555386 CERS2Q96G23 380 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 NSL1Q96IY1 281 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ANKRD27Q96NW4 1050 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 VPS35Q96QK1 796 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 COPS8Q99627 209 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 KIFC1Q9BW19 673 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ZCCHC2Q9C0B9 1178 aaKnown RBP9.69□□□□□ -0.86
PSEN1-213ENST00000555386 WWP1Q9H0M0 922 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 C12orf65Q9H3J6 166 aaKnown RBP9.69□□□□□ -0.86
PSEN1-213ENST00000555386 DPEP2Q9H4A9 486 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 PCMTD2Q9NV79 361 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 THAP1Q9NVV9 213 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ZFATQ9P243 1243 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 MARCH4Q9P2E8 410 aaPredicted RBP9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TXNDC16Q9P2K2 825 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 HEY2Q9UBP5 337 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 GPR34Q9UPC5 381 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 DGKBQ9Y6T7 804 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 FAM237BA0A1B0GVD1 139 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 SPAARA0A1B0GVQ0 90 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 SLC30A4O14863 429 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 CD3EAPO15446 510 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 FLRT2O43155 660 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 VEGFDO43915 354 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 PCDHGA12O60330 932 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 OR1I1O60431 355 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ITGA2BP08514 1039 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ZNF883P0CG24 379 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ALPPL2P10696 532 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 RALBP11234 206 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ITGB6P18564 788 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 PAMP19021 973 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 GRK2P25098 689 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ACRV1P26436 265 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 PMLP29590 882 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 SPRP35270 261 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 MAGEA12P43365 314 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 NOVA1P51513 510 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 LIMK1P53667 647 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 DAB2P98082 770 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 B4GALNT1Q00973 533 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 BST1Q10588 318 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 STX3Q13277 289 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 SLC14A1Q13336 389 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 THOC5Q13769 683 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 CHI3L2Q15782 390 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 INAVAQ3KP66 663 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 KANSL1Q7Z3B3 1105 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 LRRTM4Q86VH4 590 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 GKN2Q86XP6 184 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 CLDN19Q8N6F1 224 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 DDHD1Q8NEL9 900 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 PTCD3Q96EY7 689 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 CNDP2Q96KP4 475 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 TBC1D10AQ9BXI6 508 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 GSDMCQ9BYG8 508 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 MMADHCQ9H3L0 296 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 MRM3Q9HC36 420 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 TREX1Q9NSU2 369 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 C20orf96Q9NUD7 363 aaPredicted RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 NSMCE4AQ9NXX6 385 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 NOP53Q9NZM5 478 aaKnown RBP9.68□□□□□ -0.86
PSEN1-213ENST00000555386 FTSJ1Q9UET6 329 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 SLC23A2Q9UGH3 650 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 PCOLCE2Q9UKZ9 415 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 TRIM33Q9UPN9 1127 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 STK38LQ9Y2H1 464 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 ST14Q9Y5Y6 855 aa9.68□□□□□ -0.86
PSEN1-213ENST00000555386 UBA6A0AVT1 1052 aaPredicted RBP9.67□□□□□ -0.86
PSEN1-213ENST00000555386 CPED1A4D0V7 1026 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 LMO7DNF2Z398 122 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 H7C0S8 307 aa9.67□□□□□ -0.86
PSEN1-213ENST00000555386 HGSO14964 777 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms