RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 RARRES3Q9UL19 164 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 PPP2R2CQ9Y2T4 447 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 RPS6KL1Q9Y6S9 549 aa11.52□□□□□ -0.57
VRK1-204ENST00000555351 LOC101059948A0A1B0GTJ6 334 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 SLC5A10A0PJK1 596 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 C21orf140B9A014 251 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 TERTO14746 1132 aaKnown RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 MAP3K7O43318 606 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 CCNYL3P0C7X3 344 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 ACADLP28330 430 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 TTPAP49638 278 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 PPP1CAP62136 330 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 PRAMEP78395 509 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 CCDC38Q502W7 563 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 DUS1LQ6P1R4 473 aaKnown RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 TBC1D21Q8IYX1 336 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 TAB3Q8N5C8 712 aaPredicted RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 PPHLN1Q8NEY8 458 aaKnown RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 SEMA4CQ9C0C4 833 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 TWSG1Q9GZX9 223 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 CHRNA10Q9GZZ6 450 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 MRM3Q9HC36 420 aaKnown RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 STARD5Q9NSY2 213 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 PIH1D1Q9NWS0 290 aaKnown RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 BFARQ9NZS9 450 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 FAM8A1Q9UBU6 413 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 PADI1Q9ULC6 663 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 TTC7AQ9ULT0 858 aaPredicted RBP11.51□□□□□ -0.57
VRK1-204ENST00000555351 JRKLQ9Y4A0 524 aa11.51□□□□□ -0.57
VRK1-204ENST00000555351 FASNP49327 2511 aaKnown RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 COL6A6A6NMZ7 2263 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 C2orf74A8MZ97 194 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 CEP104O60308 925 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 KIAA0754O94854 1291 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 GOT2P00505 430 aaKnown RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 PRSS56P0CW18 603 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 ETS1P14921 441 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 FOLR1P15328 257 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 ZNF28P17035 718 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 TPSB2P20231 275 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 PDHA2P29803 388 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 SHMT2P34897 504 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 GRIA1P42261 906 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 MAGEA6P43360 314 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 KPNA2P52292 529 aaKnown RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 CDC20Q12834 499 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 TPSAB1Q15661 275 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 FASTKD1Q53R41 847 aaKnown RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 ZNF534Q76KX8 674 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 GSTA5Q7RTV2 222 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 AMIGO1Q86WK6 493 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 LRRC6Q86X45 466 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 GLIS1Q8NBF1 620 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 OR4E2Q8NGC2 313 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 NAT14Q8WUY8 206 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 ASZ1Q8WWH4 475 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 STARD8Q92502 1023 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 ELMO1Q92556 727 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 ZNF501Q96CX3 271 aaPredicted RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 PBKQ96KB5 322 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 LRFN5Q96NI6 719 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 NAP1L3Q99457 506 aaPredicted RBP11.5□□□□□ -0.57
VRK1-204ENST00000555351 GPR87Q9BY21 358 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 FANCEQ9HB96 536 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 KCND1Q9NSA2 647 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 TREX1Q9NSU2 369 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 OR6C2Q9NZP2 312 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 ANAPC5Q9UJX4 755 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 PCDHB3Q9Y5E6 796 aa11.5□□□□□ -0.57
VRK1-204ENST00000555351 PIKFYVEQ9Y2I7 2098 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 OR51F1A6NGY5 319 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 KPNA5O15131 536 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 EBLN1P0CF75 366 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 PLA2G2AP14555 144 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 ITGB6P18564 788 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 POLR2CP19387 275 aaPredicted RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 TCN2P20062 427 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 CDH3P22223 829 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 PRDX3P30048 256 aaKnown RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 DLSTP36957 453 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 CCR10P46092 362 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 CYP4F2P78329 520 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 SARNPP82979 210 aaKnown RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 SYTL3Q4VX76 610 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 DNAJC21Q5F1R6 531 aaKnown RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 PWWP2BQ6NUJ5 590 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 LRRC8BQ6P9F7 803 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 ZNF517Q6ZMY9 492 aaPredicted RBP11.49□□□□□ -0.57
VRK1-204ENST00000555351 SLC22A15Q8IZD6 547 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 ADGRF3Q8IZF5 1079 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 GALNT6Q8NCL4 622 aa11.49□□□□□ -0.57
VRK1-204ENST00000555351 OR6P1Q8NGX9 317 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms