RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 NSUN3Q9H649 340 aaKnown RBP12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 BPIFA1Q9NP55 256 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 SMPD3Q9NY59 655 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 ANAPC2Q9UJX6 822 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 UBA6A0AVT1 1052 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 FAM220BPB1ANY3 271 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 SCN2BO60939 215 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 ALPIP09923 528 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 POLR2IP36954 125 aaKnown RBP12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 HLCSP50747 726 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 BIRC2Q13490 618 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 NEK10Q6ZWH5 1172 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 NXPE1Q8N323 547 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 CD99L2Q8TCZ2 262 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 TANKQ92844 425 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 MPP4Q96JB8 637 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 ATXN10Q9UBB4 475 aa12.36□□□□□ -0.43
PPP4R3A-206ENST00000554943 STX7O15400 261 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 NUAK1O60285 661 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 TBL1XO60907 577 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 TRMUO75648 421 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 SEC14L2O76054 403 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PAPLNO95428 1278 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 RAP2AP10114 183 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 AOAHP28039 575 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ALDH3A2P51648 485 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PLA2G4EQ3MJ16 856 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 AASDHQ4L235 1098 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 FAM117BQ6P1L5 589 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 DNAJB7Q7Z6W7 309 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 FAM47BQ8NA70 645 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PNPT1Q8TCS8 783 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 POP5Q969H6 163 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PPP3R2Q96LZ3 170 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 CIPCQ9C0C6 399 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PFDN6O15212 129 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PRAMEF1O95521 474 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 HTR1AP08908 422 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 IL10P22301 178 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 NOGQ13253 232 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ZC3H12BQ5HYM0 836 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ATXN7L2Q5T6C5 722 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ATG9BQ674R7 924 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 CRTC1Q6UUV9 634 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 RYBPQ8N488 228 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 CDYL2Q8N8U2 506 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 GPR26Q8NDV2 337 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 EXT2Q93063 718 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 SCRN2Q96FV2 425 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 C17orf80Q9BSJ5 609 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 OSBPL10Q9BXB5 764 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 MBD1Q9UIS9 605 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 INSL5Q9Y5Q6 135 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 SLC28A1O00337 649 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 MANBAO00462 879 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 EI24O14681 340 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 IL6P05231 212 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 HOXB6P17509 224 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 RPL10P27635 214 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 RPS9P46781 194 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 MYBPC3Q14896 1274 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 GAREM2Q75VX8 874 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 C16orf59Q7L2K0 433 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 NECAB2Q7Z6G3 386 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ZBTB2Q8N680 514 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 FAM86B1Q8N7N1 296 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 DNAJB14Q8TBM8 379 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ESAMQ96AP7 390 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 TOX2Q96NM4 488 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 SLC12A9Q9BXP2 914 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 DDX18Q9NVP1 670 aaKnown RBP12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 SUN2Q9UH99 717 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 ERVK-11Q9UQG0 969 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 PCDHGB1Q9Y5G3 927 aa12.35□□□□□ -0.43
PPP4R3A-206ENST00000554943 COL4A2P08572 1712 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 NPIPB15A6NHN6 443 aaPredicted RBP12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 RAD51BO15315 384 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 SLC16A5O15375 505 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 CLOCKO15516 846 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 MPC1LP0DKB6 136 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 NCK1P16333 377 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 LHCGRP22888 699 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 ARPP19P56211 112 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 DCDC1P59894 354 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 HPCAP84074 193 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 ISOC1Q96CN7 298 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 NMD3Q96D46 503 aaKnown RBP12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 RPL10LQ96L21 214 aaKnown RBP12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 C1orf50Q9BV19 199 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 CHID1Q9BWS9 393 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 ACPTQ9BZG2 426 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 ZFYVE1Q9HBF4 777 aa12.34□□□□□ -0.43
PPP4R3A-206ENST00000554943 SIRT5Q9NXA8 310 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms