RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 IL1RAPQ9NPH3 570 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MAN2C1Q9NTJ4 1040 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 FAM118AQ9NWS6 357 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CNOT2Q9NZN8 540 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SUN2Q9UH99 717 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DCTN4Q9UJW0 460 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 OGDHLQ9ULD0 1010 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MYRFQ9Y2G1 1151 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ASB1Q9Y576 335 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PCDHGA2Q9Y5H1 932 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 A0A0J9YYE9 177 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 A0A1W2PQH9 124 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SLC5A10A0PJK1 596 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ARHGAP10A1A4S6 786 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF840PA6NDX5 716 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PRAMEF25A6NGN4 478 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 GOLGA8RI6L899 631 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SLC28A1O00337 649 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 KIAA0355O15063 1070 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 UBDO15205 165 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 INSIG1O15503 277 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ACSL4O60488 711 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MOSPD3O75425 235 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 LYPD3O95274 346 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MAP3K6O95382 1288 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TRBC1P01850 177 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ITGB1P05556 798 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 USP17L7P0C7H9 530 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CKBP12277 381 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CHRNA4P43681 627 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MAPK8P45983 427 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ALDH9A1P49189 494 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CLK3P49761 638 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DNA2P51530 1060 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MAP3K7CLP57077 242 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 BNC1Q01954 994 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DPTQ07507 201 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SLC10A7Q0GE19 358 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RALGDSQ12967 914 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MAD2L1Q13257 205 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 FASTKQ14296 549 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DUSP6Q16828 381 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 C1orf146Q5VVC0 180 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 LIPJQ5W064 366 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SULT1C3Q6IMI6 304 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 UGT3A1Q6NUS8 523 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ERICH5Q6P6B1 374 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 GK5Q6ZS86 529 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TRILQ7L0X0 811 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NUP54Q7Z3B4 507 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TMEM179BQ7Z7N9 219 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DTWD1Q8N5C7 304 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 OR4L1Q8NH43 312 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 OR5K1Q8NHB7 308 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 STAG3L4Q8TBR4 150 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 OSCP1Q8WVF1 389 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DNAJB3Q8WWF6 145 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CYGBQ8WWM9 190 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ASB11Q8WXH4 323 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 LRTOMTQ8WZ04 291 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CLP1Q92989 425 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MAGED4Q96JG8 741 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF347Q96SE7 839 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CDRT15Q96T59 188 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 OSMRQ99650 979 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DGCR6LQ9BY27 220 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 A4GALTQ9NPC4 353 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 C20orf96Q9NUD7 363 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SMPD3Q9NY59 655 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 GALPQ9UBC7 116 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ITM2BQ9Y287 266 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SLC38A8A6NNN8 435 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 J3KR12 359 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 NOP56O00567 594 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 RNASET2O00584 256 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CBFA2T3O75081 653 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PRPS2P11908 318 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DDX6P26196 483 aaKnown RBP eCLIP3.37□□□□□ -1.873e-6■■■■□ 22.5
SEC23A-207ENST00000554615 TTPAP49638 278 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ARSFP54793 590 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DYNLT1P63172 113 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 ZXDBP98169 803 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 VAC14Q08AM6 782 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 C2orf80Q0P641 193 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 PMS2P3Q13401 168 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 DOC2BQ14184 412 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 POLD3Q15054 466 aaPredicted RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SEC23BQ15437 767 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SLC39A12Q504Y0 691 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GRHL2Q6ISB3 625 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 LETMD1Q6P1Q0 360 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 RBM44Q6ZP01 1051 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 IKBIPQ70UQ0 350 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 SLC24A5Q71RS6 500 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 GOLGA7Q7Z5G4 137 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 RBM23Q86U06 439 aaKnown RBP3.37□□□□□ -1.87
SEC23A-207ENST00000554615 CCDC190Q86UF4 302 aa3.37□□□□□ -1.87
SEC23A-207ENST00000554615 FAM9CQ8IZT9 166 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms