RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NPTX1Q15818 432 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 RTL3Q8N8U3 475 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 OR2B2Q9GZK3 357 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 PRDM8Q9NQV8 689 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 CARD8Q9Y2G2 431 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 PCDHGA10Q9Y5H3 936 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 BTN3A1O00481 513 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 PRMT5O14744 637 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 SCO2O43819 266 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 OR4F21O95013 312 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 MFN2O95140 757 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 NAT1P18440 290 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 FMO3P31513 532 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 POLR2JP52435 117 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 CLCA4Q14CN2 919 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 SYVN1Q86TM6 617 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 RBM4BQ9BQ04 359 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 RBM4Q9BWF3 364 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 SLC25A51Q9H1U9 297 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 ABCG8Q9H221 673 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 OSGIN1Q9UJX0 560 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 INVSQ9Y283 1065 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 B4GALT3O60512 393 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 SLC22A3O75751 556 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 GLP2RO95838 553 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 ITGB6P18564 788 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 SLC14A2Q15849 920 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 CCDC58Q4VC31 144 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 OVOS1Q6IE37 1185 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 ENPP6Q6UWR7 440 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 CXCL17Q6UXB2 119 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 CCBE1Q6UXH8 406 aaPredicted RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 SPATC1Q76KD6 591 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 HID1Q8IV36 788 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 ZHX1-C8orf76Q96EF9 292 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 IMP4Q96G21 291 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 GPR21Q99679 349 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 COMMD8Q9NX08 183 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 DNAJB9Q9UBS3 223 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 EIF2B4Q9UI10 523 aaKnown RBP16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 UGT2A1Q9Y4X1 527 aa16.65■□□□□ 0.26
PPP4R3A-202ENST00000554390 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 NIPSNAP2O75323 286 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 ECI2O75521 394 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 ST13P50502 369 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 RACK1P63244 317 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 NKG7Q16617 165 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 UPP1Q16831 310 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 PRSS48Q7RTY5 328 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 FBXO39Q8N4B4 442 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 PROX1Q92786 737 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 C3orf18Q9UK00 162 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 FBXO10Q9UK96 956 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 EIF3LQ9Y262 564 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 PCSK1P29120 753 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 CD52P31358 61 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 MASP1P48740 699 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 NFKB2Q00653 900 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 RAPSNQ13702 412 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 TRIP4Q15650 581 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 SYT6Q5T7P8 510 aaPredicted RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 MILR1Q7Z6M3 343 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 CELF2-AS1Q8N7Q2 184 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 SIDT2Q8NBJ9 832 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 ISG20Q96AZ6 181 aaKnown RBP16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 ASB2Q96Q27 587 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 ARPC5LQ9BPX5 153 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 AIG1Q9NVV5 245 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 USE1Q9NZ43 259 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 C5orf42Q9H799 3197 aa16.64■□□□□ 0.25
PPP4R3A-202ENST00000554390 C17orf102A2RUQ5 167 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 SAGE2PA6NJ88 616 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 H0Y626 953 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 KMOO15229 486 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 TRIM16O95361 564 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 FADS2O95864 444 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 PTTG1O95997 202 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 FTH1P02794 183 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 ATXN1LP0C7T5 689 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 PRKCAP17252 672 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 CRYBB1P53674 252 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 IL1RL1Q01638 556 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 ASCC1Q8N9N2 400 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 FIG4Q92562 907 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 RPRD1AQ96P16 312 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 OPTCQ9UBM4 332 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 ZMYM5Q9UJ78 669 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 PRG3Q9Y2Y8 225 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 AREL1O15033 823 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 B3GALT4O96024 378 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 CNPP09543 421 aaKnown RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 SGO1Q5FBB7 561 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 SPATA2LQ8IUW3 424 aaPredicted RBP16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 METTL4Q8N3J2 472 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 EFHBQ8N7U6 833 aa16.63■□□□□ 0.25
PPP4R3A-202ENST00000554390 ATAD1Q8NBU5 361 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms