RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 FAM124AQ86V42 546 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 LRRTM4Q86VH4 590 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 TRIM69Q86WT6 500 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ZNF547Q8IVP9 402 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ADHFE1Q8IWW8 467 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 OXR1Q8N573 874 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 OR2T34Q8NGX1 318 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 OR2L2Q8NH16 312 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 MCOLN3Q8TDD5 553 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ACTRT2Q8TDY3 377 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ESAMQ96AP7 390 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 HIST1H2AHQ96KK5 128 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 FOPNLQ96NB1 174 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 OR52B2Q96RD2 323 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 HIST1H2AJQ99878 128 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 H2AFJQ9BTM1 129 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 CCDC106Q9BWC9 280 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 NUSAP1Q9BXS6 441 aaKnown RBP12.42□□□□□ -0.42
CACNB3-223ENST00000552480 SGK2Q9HBY8 427 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ZBTB26Q9HCK0 441 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ARHGEF3Q9NR81 526 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 ARL15Q9NXU5 204 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 OPTCQ9UBM4 332 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 TRIM33Q9UPN9 1127 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 MRPS17Q9Y2R5 130 aaKnown RBP12.42□□□□□ -0.42
CACNB3-223ENST00000552480 TMEM98Q9Y2Y6 226 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 FIS1Q9Y3D6 152 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 PIKFYVEQ9Y2I7 2098 aa12.42□□□□□ -0.42
CACNB3-223ENST00000552480 GOLGA8QA0A0J9YX86 632 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 GOLGA8OA6NCC3 632 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 KLHL33A6NCF5 533 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 MGAT4DA6NG13 374 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 LRRC72A6NJI9 287 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 CAPN14A8MX76 684 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 GOLGA8NF8WBI6 632 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 H3BM21 787 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 K7EPI3 171 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 GIPC1O14908 333 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 CCNT2O60583 730 aaKnown RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 HNRNPCL1O60812 293 aaKnown RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 CRCPO75575 148 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 DNAJC8O75937 253 aaPredicted RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 UNC5CO95185 931 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 CATP04040 527 aaKnown RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 UROSP10746 265 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 EPHA3P29320 983 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 TPMTP51580 245 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 ARHGAP8P85298 464 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 TFF2Q03403 129 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 ABRQ12979 859 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 LSM12Q3MHD2 195 aaKnown RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 UGT3A2Q3SY77 523 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 XKR5Q6UX68 686 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 MBOAT1Q6ZNC8 495 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 Q6ZS52 159 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 GPRIN3Q6ZVF9 776 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 SYT13Q7L8C5 426 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 C11orf96Q7Z7L8 435 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 CFAP206Q8IYR0 622 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 LILRA3Q8N6C8 439 aaPredicted RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 TEX9Q8N6V9 391 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 FBXO15Q8NCQ5 510 aaPredicted RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 DENND6BQ8NEG7 585 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 HMGB4Q8WW32 186 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 FOXJ1Q92949 421 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 FBXL8Q96CD0 374 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 PPP1R36Q96LQ0 422 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 LGR4Q9BXB1 951 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 BTBD1Q9H0C5 482 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 WDR55Q9H6Y2 383 aaPredicted RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 ITM2CQ9NQX7 267 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 ARL8BQ9NVJ2 186 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 USP36Q9P275 1121 aaKnown RBP12.41□□□□□ -0.42
CACNB3-223ENST00000552480 ARMCX1Q9P291 453 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 GULP1Q9UBP9 304 aa12.41□□□□□ -0.42
CACNB3-223ENST00000552480 A0A1B0GTL3 188 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 ARHGEF33A8MVX0 844 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 E9PBE3 544 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 OR7A17O14581 309 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 KMOO15229 486 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 KLHL41O60662 606 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 STK16O75716 305 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 FSBPO95073 299 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 OTCP00480 354 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 IGLV3-19P01714 112 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 HOXC4P09017 264 aaPredicted RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 T-ENOLP0DO92 83 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 NCF2P19878 526 aaPredicted RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 TARSP26639 723 aaKnown RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 PDHA2P29803 388 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 MAT2AP31153 395 aaKnown RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 SLC6A12P48065 614 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 RPA4Q13156 261 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 UBAP2LQ14157 1087 aaKnown RBP12.4□□□□□ -0.42
CACNB3-223ENST00000552480 PLA2G4EQ3MJ16 856 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 NXNQ6DKJ4 435 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 LRRC70Q7Z2Q7 622 aa12.4□□□□□ -0.42
CACNB3-223ENST00000552480 CHCHD4Q8N4Q1 142 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms