RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, human

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPN3-209	ENST00000551079	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	FTO	Q9C0B1	505 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	EIF2B3	Q9NR50	452 aa	Known RBP	4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	PLCXD1	Q9NUJ7	323 aa		4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	SEPT11	Q9NVA2	429 aa	Known RBP	4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	TAS2R14	Q9NYV8	317 aa		4.1	□□□□□ -1.75
GPN3-209	ENST00000551079	LRRC72	A6NJI9	287 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	MITF	O75030	526 aa	Predicted RBP	4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	AIMP2	Q13155	320 aa	Known RBP	4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	MELK	Q14680	651 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	P2RY6	Q15077	328 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	FAM98B	Q52LJ0	330 aa	Known RBP	4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	CYP4A22	Q5TCH4	519 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	TRIM65	Q6PJ69	517 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	TMEM178A	Q8NBL3	297 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	C1orf131	Q8NDD1	294 aa	Known RBP	4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	ERLEC1	Q96DZ1	483 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	HRH4	Q9H3N8	390 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	SMARCAD1	Q9H4L7	1026 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	PAK5	Q9P286	719 aa		4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	ASTN2	O75129	1339 aa	Predicted RBP	4.09	□□□□□ -1.75
GPN3-209	ENST00000551079	KRTAP9-6	A8MVA2	160 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079		E9PI62	339 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	SSX4	O60224	188 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	PRKRA	O75569	313 aa	Known RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	CDC123	O75794	336 aa	Predicted RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	ZFAND5	O76080	213 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	SORBS2	O94875	1100 aa	Known RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	EFNA1	P20827	205 aa	Predicted RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	SP100	P23497	879 aa	Predicted RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	ARF3	P61204	181 aa	Predicted RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	ARF1	P84077	181 aa	Known RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	SP3	Q02447	781 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	PRKCZ	Q05513	592 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	DLG2	Q15700	870 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	SUSD6	Q92537	303 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	LRRC59	Q96AG4	307 aa	Known RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	MPP4	Q96JB8	637 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	MAGED4	Q96JG8	741 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	RBM4B	Q9BQ04	359 aa	Known RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	SYT11	Q9BT88	431 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	CDK19	Q9BWU1	502 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	RTN4R	Q9BZR6	473 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	P2RY12	Q9H244	342 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	ZNF644	Q9H582	1327 aa	Predicted RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	INTS9	Q9NV88	658 aa	Known RBP	4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	OSGIN1	Q9UJX0	560 aa		4.08	□□□□□ -1.76
GPN3-209	ENST00000551079	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.08	□□□□□ -1.76	9e-14	■□□□□ 10.1
GPN3-209	ENST00000551079	SOS1	Q07889	1333 aa	Predicted RBP	4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	MMP9	P14780	707 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	MAPK4	P31152	587 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	MAGEA11	P43364	429 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	SLC6A12	P48065	614 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	DCAF7	P61962	342 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	PNRC1	Q12796	327 aa	Predicted RBP	4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	DDX10	Q13206	875 aa	Known RBP	4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	MDH1B	Q5I0G3	518 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	TCTE1	Q5JU00	501 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	GRTP1	Q5TC63	336 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	ZNF613	Q6PF04	617 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079		Q6ZSR9	355 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	LSMEM2	Q8N112	164 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	TTC39C	Q8N584	583 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	ANKRD52	Q8NB46	1076 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	FGFBP3	Q8TAT2	258 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	GRHL3	Q8TE85	626 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	RNF128	Q8TEB7	428 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	HPSE2	Q8WWQ2	592 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	OR6C1	Q96RD1	312 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	VGLL1	Q99990	258 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	SYT15	Q9BQS2	421 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	PITPNM3	Q9BZ71	974 aa		4.07	□□□□□ -1.76
GPN3-209	ENST00000551079	IGLV7-46	A0A075B6I9	117 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	LOC101059948	A0A1B0GTJ6	334 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	KLF11	O14901	512 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	VPREB1	P12018	145 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	ZNF10	P21506	573 aa	Predicted RBP	4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	SUOX	P51687	545 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	MFAP4	P55083	255 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	SNX16	P57768	344 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	HNRNPD	Q14103	355 aa	Known RBP	4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	CTU2	Q2VPK5	515 aa	Known RBP	4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	CCDC30	Q5VVM6	783 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	PAPD5	Q8NDF8	572 aa	Known RBP	4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	OR2T11	Q8NH01	316 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	SAT2	Q96F10	170 aa	Predicted RBP	4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	EGFL8	Q99944	293 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	CABLES2	Q9BTV7	478 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	VN1R1	Q9GZP7	353 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	LAT2	Q9GZY6	243 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	LARS	Q9P2J5	1176 aa	Known RBP	4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	ZNF69	Q9UC07	566 aa		4.06	□□□□□ -1.76
GPN3-209	ENST00000551079	PCNX3	Q9H6A9	2034 aa		4.05	□□□□□ -1.76
GPN3-209	ENST00000551079	LNP1	A1A4G5	178 aa		4.05	□□□□□ -1.76
GPN3-209	ENST00000551079	PTGES3L	E9PB15	166 aa		4.05	□□□□□ -1.76
GPN3-209	ENST00000551079	CA6	P23280	308 aa		4.05	□□□□□ -1.76
GPN3-209	ENST00000551079	SLC6A6	P31641	620 aa		4.05	□□□□□ -1.76
GPN3-209	ENST00000551079	GARS	P41250	739 aa	Known RBP	4.05	□□□□□ -1.76

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