RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 MAGEE1Q9HCI5 957 aa9.35□□□□□ -0.91
NCKAP1L-206ENST00000548980 PCDH18Q9HCL0 1135 aa9.35□□□□□ -0.91
NCKAP1L-206ENST00000548980 SEC14L3Q9UDX4 400 aa9.35□□□□□ -0.91
NCKAP1L-206ENST00000548980 CDC23Q9UJX2 597 aa9.35□□□□□ -0.91
NCKAP1L-206ENST00000548980 HS3ST3B1Q9Y662 390 aa9.35□□□□□ -0.91
NCKAP1L-206ENST00000548980 AP1M2Q9Y6Q5 423 aa9.35□□□□□ -0.91
NCKAP1L-206ENST00000548980 FAM221AA4D161 298 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TMEM200CA6NKL6 621 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 BTN3A3O00478 584 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 BTN3A1O00481 513 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 FANCGO15287 622 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 ZSCAN9O15535 394 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 GPR39O43194 453 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 KLHL18O94889 574 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 SLC35G4P0C7Q5 338 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 RARAP10276 462 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 MST1P26927 711 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 NDUFS1P28331 727 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 CASP6P55212 293 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 SRSF11Q05519 484 aaKnown RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 RBPJQ06330 500 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 BECN1Q14457 450 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 C3AR1Q16581 482 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 IFI16Q16666 785 aaKnown RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TUBB8Q3ZCM7 444 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 NKAIN1Q4KMZ8 207 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 BOLA3Q53S33 107 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TCP11X2Q5H9J9 407 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 NCBP2-AS2Q69YL0 99 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TXNRD3NBQ6F5E7 133 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 FAAH2Q6GMR7 532 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TMEM220Q6QAJ8 160 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 KIRREL2Q6UWL6 708 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 BEND7Q8N7W2 519 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 LRRN4Q8WUT4 740 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 N4BP2L2Q92802 583 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 FATE1Q969F0 183 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 RMDN2Q96LZ7 410 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 LMF1Q96S06 567 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 ENKD1Q9H0I2 346 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 SRMSQ9H3Y6 488 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 DEF6Q9H4E7 631 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 FAM60AQ9NP50 221 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 BPIFA1Q9NP55 256 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 SEMA3GQ9NS98 782 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 SLC22A11Q9NSA0 550 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 ABI3Q9P2A4 366 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 DNMT3AQ9Y6K1 912 aaPredicted RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 PRRC2AP48634 2157 aaKnown RBP9.34□□□□□ -0.91
NCKAP1L-206ENST00000548980 ABCA4P78363 2273 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 FLNAP21333 2647 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 TRAV17A0A0B4J275 112 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 TMCO5BA8MYB1 307 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 AURKAO14965 403 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 HCRTR1O43613 425 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 SLC19A2O60779 497 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 MT-CYBP00156 380 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 CTSBP07858 339 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 ESRRAP11474 423 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 CCNCP24863 283 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 EEF1GP26641 437 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 GABRA4P48169 554 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 TNFSF10P50591 281 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 CSNK1G2P78368 415 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 MEX3BQ6ZN04 569 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 TGIF2LYQ8IUE0 185 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 C19orf47Q8N9M1 422 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 DDHD1Q8NEL9 900 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 ACVR1CQ8NER5 493 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 LCN9Q8WX39 176 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 TSGA13Q96PP4 275 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 SPSB2Q99619 263 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 NRTNQ99748 197 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 TREX2Q9BQ50 279 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 XPO4Q9C0E2 1151 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 CLSTN2Q9H4D0 955 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 GSX1Q9H4S2 264 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 MRM3Q9HC36 420 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 SAMSN1Q9NSI8 373 aaKnown RBP9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 FAM8A1Q9UBU6 413 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 PCDHGB6Q9Y5F9 930 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 COLEC10Q9Y6Z7 277 aa9.33□□□□□ -0.92
NCKAP1L-206ENST00000548980 DYTNA2CJ06 578 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 MGAT4DA6NG13 374 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 CRYABP02511 175 aaKnown RBP9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 ITGAXP20702 1163 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 TMPRSS15P98073 1019 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 MMRN1Q13201 1228 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 KRT33BQ14525 404 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 KRT81Q14533 505 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 GSE1Q14687 1217 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 PAFAH1B3Q15102 231 aaKnown RBP9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 LDLRAP1Q5SW96 308 aa9.32□□□□□ -0.92
NCKAP1L-206ENST00000548980 FNBP1LQ5T0N5 605 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms