RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FASTKQ14296 549 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 VPS26BQ4G0F5 336 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 DUPD1Q68J44 220 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GPRIN3Q6ZVF9 776 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ASRGL1Q7L266 308 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SLC41A1Q8IVJ1 513 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CMTR2Q8IYT2 770 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ACTRT2Q8TDY3 377 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TOP1MTQ969P6 601 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 OTUB2Q96DC9 234 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 NUS1Q96E22 293 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 RMND5BQ96G75 393 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SGK2Q9HBY8 427 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 OSER1Q9NX31 292 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CCDC167Q9P0B6 97 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TMEM216Q9P0N5 145 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SERTAD3Q9UJW9 196 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ANGPT4Q9Y264 503 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CAPN8A6NHC0 703 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 LDB2O43679 373 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 LIASO43766 372 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 PIAS1O75925 651 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GIMD1P0DJR0 217 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ATP5F1P24539 256 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SERPINB1P30740 379 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SLC7A1P30825 629 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CDKN2BP42772 138 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 PGDP52209 483 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 AQP4P55087 323 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 RPL38P63173 70 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SEMG2Q02383 582 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 MAPKAPK3Q16644 382 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TRIM71Q2Q1W2 868 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 FAM26DQ5JW98 314 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CDC73Q6P1J9 531 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 SCIMPQ6UWF3 145 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 Q6ZVU0 165 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 FAM98AQ8NCA5 519 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ADCY4Q8NFM4 1077 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 NRG4Q8WWG1 115 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 LINC01599Q8WXQ3 324 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 HDAC2Q92769 488 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 RIT1Q92963 219 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 MR1Q95460 341 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 FAM124BQ9H5Z6 455 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 COPG1Q9Y678 874 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 OTOFQ9HC10 1997 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TCRBV21S2A2A0A5A6 115 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ZSCAN5BA6NJL1 495 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 IL12BP29460 328 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 DCAF12L1Q5VU92 463 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GDPD4Q6W3E5 623 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 GALNT7Q86SF2 657 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF598Q86UK7 904 aaKnown RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TMPRSS6Q8IU80 811 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 ARMC8Q8IUR7 673 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 TRIM43Q96BQ3 446 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 C8orf33Q9H7E9 229 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 INIPQ9NRY2 104 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-218ENST00000545889 F5P12259 2224 aa8.47□□□□□ -1.05
CLIP1-218ENST00000545889 MRASO14807 208 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 CHADO15335 359 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 ADAM12O43184 909 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 RPP40O75818 363 aaKnown RBP8.46□□□□□ -1.05
CLIP1-218ENST00000545889 GABBR2O75899 941 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 HSMCR30P0CW71 290 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 LAMP2P13473 410 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 PIK3R1P27986 724 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 KCNQ1P51787 676 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 CACNG1Q06432 222 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 DLG1Q12959 904 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 NFATC2Q13469 925 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 AMIGO2Q86SJ2 522 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 SMARCD2Q92925 531 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 SLC35B4Q969S0 331 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 PRICKLE1Q96MT3 831 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-218ENST00000545889 RAB11FIP5Q9BXF6 653 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 RACGAP1Q9H0H5 632 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 TRPV5Q9NQA5 729 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 TBCCD1Q9NVR7 557 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 ZNF624Q9P2J8 865 aaPredicted RBP8.46□□□□□ -1.05
CLIP1-218ENST00000545889 CNTN6Q9UQ52 1028 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 PCDHGA3Q9Y5H0 932 aa8.46□□□□□ -1.05
CLIP1-218ENST00000545889 MYOCOSA0A1B0GUC4 107 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 HEPACAM2A8MVW5 462 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 ARHGEF9O43307 516 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 TLX3O43711 291 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 MFSD11O43934 449 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 REM1O75628 298 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 STK16O75716 305 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 HLA-EP13747 358 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 IDO1P14902 403 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 HNRNPDQ14103 355 aaKnown RBP8.46□□□□□ -1.06
CLIP1-218ENST00000545889 RASA2Q15283 850 aa8.46□□□□□ -1.06
CLIP1-218ENST00000545889 SMU1Q2TAY7 513 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms