RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GCNT7Q6ZNI0 430 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 FAM83HQ6ZRV2 1179 aaPredicted RBP29.76■■■□□ 2.35
CCM2-219ENST00000544363 ZNF483Q8TF39 744 aaPredicted RBP29.76■■■□□ 2.35
CCM2-219ENST00000544363 BIRC7Q96CA5 298 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 HIST1H2AHQ96KK5 128 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 FOPNLQ96NB1 174 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 NSUN5Q96P11 429 aaKnown RBP29.76■■■□□ 2.35
CCM2-219ENST00000544363 HIST1H2AJQ99878 128 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 IER2Q9BTL4 223 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 H2AFJQ9BTM1 129 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 TMEM120AQ9BXJ8 343 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 TM7SF3Q9NS93 570 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 PCTPQ9UKL6 214 aa29.76■■■□□ 2.35
CCM2-219ENST00000544363 ERICH4A6NGS2 130 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 PRAMEF26H0Y7S4 382 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 H0Y8X5 98 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 TAPBPO15533 448 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 ANXA5P08758 320 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 PXNP49023 591 aaPredicted RBP29.75■■■□□ 2.35
CCM2-219ENST00000544363 HK2P52789 917 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 CLCQ05315 142 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 RPA4Q13156 261 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 NFATC4Q14934 902 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 CUZD1Q86UP6 607 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 FAM160A2Q8N612 972 aaPredicted RBP29.75■■■□□ 2.35
CCM2-219ENST00000544363 TMEM145Q8NBT3 493 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 CFAP61Q8NHU2 1237 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 AGR3Q8TD06 166 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 ESAMQ96AP7 390 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 SCARF2Q96GP6 870 aaPredicted RBP29.75■■■□□ 2.35
CCM2-219ENST00000544363 ARL15Q9NXU5 204 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 DMTF1Q9Y222 760 aa29.75■■■□□ 2.35
CCM2-219ENST00000544363 PABPN1LA6NDY0 278 aaKnown RBP29.74■■■□□ 2.35
CCM2-219ENST00000544363 ALOX15P16050 662 aaPredicted RBP29.74■■■□□ 2.35
CCM2-219ENST00000544363 TSPAN8P19075 237 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 NUDT1P36639 197 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 CXCL12P48061 93 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 AQP5P55064 265 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 AP1S2P56377 157 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 C18orf21Q32NC0 220 aaPredicted RBP29.74■■■□□ 2.35
CCM2-219ENST00000544363 EIF2B4Q9UI10 523 aaKnown RBP29.74■■■□□ 2.35
CCM2-219ENST00000544363 ASB1Q9Y576 335 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 UBFD1O14562 309 aaKnown RBP29.74■■■□□ 2.35
CCM2-219ENST00000544363 KELP23276 732 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 YPEL5P62699 121 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 MBOAT1Q6ZNC8 495 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 GALNT13Q8IUC8 556 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 UBTD2Q8WUN7 234 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 WWOXQ9NZC7 414 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 SUFUQ9UMX1 484 aa29.74■■■□□ 2.35
CCM2-219ENST00000544363 ARHGEF33A8MVX0 844 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 E2F3O00716 465 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 ZNF195O14628 629 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 TOR1BO14657 336 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 CATP04040 527 aaKnown RBP29.73■■■□□ 2.35
CCM2-219ENST00000544363 MAP4P27816 1152 aaKnown RBP29.73■■■□□ 2.35
CCM2-219ENST00000544363 DMPKQ09013 629 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 PYCR3Q53H96 274 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 SH2D4BQ5SQS7 431 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 METRNLQ641Q3 311 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 C6orf89Q6UWU4 347 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 OR56A4Q8NGH8 313 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 TRPC4APQ8TEL6 797 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 RMDN2Q96LZ7 410 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 TMEM79Q9BSE2 394 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 TIMM29Q9BSF4 260 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 OR52A5Q9H2C5 316 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 FGF22Q9HCT0 170 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 MRPL40Q9NQ50 206 aaKnown RBP29.73■■■□□ 2.35
CCM2-219ENST00000544363 MOSPD1Q9UJG1 213 aa29.73■■■□□ 2.35
CCM2-219ENST00000544363 SLCO1B7G3V0H7 640 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 HSPA7P48741 367 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 LCP2Q13094 533 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 METTL2BQ6P1Q9 378 aaKnown RBP29.72■■■□□ 2.35
CCM2-219ENST00000544363 CHST15Q7LFX5 561 aaPredicted RBP29.72■■■□□ 2.35
CCM2-219ENST00000544363 MAVSQ7Z434 540 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 SPATS2Q86XZ4 545 aaKnown RBP29.72■■■□□ 2.35
CCM2-219ENST00000544363 KIRREL3Q8IZU9 778 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 TCAIMQ8N3R3 496 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 WDR92Q96MX6 357 aa29.72■■■□□ 2.35
CCM2-219ENST00000544363 SEMA4BQ9NPR2 832 aaPredicted RBP29.72■■■□□ 2.35
CCM2-219ENST00000544363 ZBTB32Q9Y2Y4 487 aaPredicted RBP29.72■■■□□ 2.35
CCM2-219ENST00000544363 MATN2O00339 956 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 KCNJ13O60928 360 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 HTR1BP28222 390 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 MAGEA9P43362 315 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 HNMTP50135 292 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 ENPP7Q6UWV6 458 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 HGH1Q9BTY7 390 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 CD244Q9BZW8 370 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 ZBTB26Q9HCK0 441 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 VTI1BQ9UEU0 232 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 PRSS38A1L453 326 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 PPP6CO00743 305 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 NDUFS2O75306 463 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 MLYCDO95822 493 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 ACP5P13686 325 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 ACADLP28330 430 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 GGT5P36269 586 aa29.71■■■□□ 2.35
CCM2-219ENST00000544363 SH3BP2P78314 561 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms