RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 DNAJC3Q13217 504 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PRKG2Q13237 762 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CSHL1Q14406 222 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 C14orf28Q4W4Y0 310 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PPM1JQ5JR12 505 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CAPRIN2Q6IMN6 1127 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 LRRC8EQ6NSJ5 796 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 DUS1LQ6P1R4 473 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 OGFOD3Q6PK18 319 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 TMEM207Q6UWW9 146 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 KANSL1Q7Z3B3 1105 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 NAXDQ8IW45 347 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 SLC35F3Q8IY50 421 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 NAGSQ8N159 534 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 RIBC1Q8N443 379 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 SFRP1Q8N474 314 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 ARL14Q8N4G2 192 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 AVL9Q8NBF6 648 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 KYQ8NBH2 561 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 SLC37A2Q8TED4 501 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CNDP2Q96KP4 475 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 APOLD1Q96LR9 279 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 SLC38A3Q99624 504 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 TMEM109Q9BVC6 243 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 UNKQ9C0B0 810 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 TRIT1Q9H3H1 467 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 NCKIPSDQ9NZQ3 722 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF624Q9P2J8 865 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CPNE7Q9UBL6 633 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 FTSJ1Q9UET6 329 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PCOLCE2Q9UKZ9 415 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PADI4Q9UM07 663 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 RUVBL2Q9Y230 463 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 CDYLQ9Y232 598 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 BTBD3Q9Y2F9 522 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 TDRKHQ9Y2W6 561 aaKnown RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 NFS1Q9Y697 457 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 ZFHX2Q9C0A1 2572 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-221ENST00000543545 LRRK1Q38SD2 2015 aa9.92□□□□□ -0.82
CPSF7-221ENST00000543545 PLXNA2O75051 1894 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 PRAMEF33A0A0G2JMD5 474 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 A6NCN8 305 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 GOLGA8RI6L899 631 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 EIF3FO00303 357 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 ZBTB14O43829 449 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 NOBOXO60393 691 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 SYF2O95926 243 aaKnown RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CATP04040 527 aaKnown RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 ALDOAP04075 364 aaKnown RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 MYZAPP0CAP1 466 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 ZNF37AP17032 561 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 XRCC1P18887 633 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 ACADLP28330 430 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 NDUFS1P28331 727 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 MAPK9P45984 424 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 HHEXQ03014 270 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 GBX1Q14549 363 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 PLCL1Q15111 1095 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 RASA2Q15283 850 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 ZKSCAN8Q15776 578 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 FAM83EQ2M2I3 478 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CCDC157Q569K6 752 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 KLC3Q6P597 504 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 XKR5Q6UX68 686 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 UNC5DQ6UXZ4 953 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CYHR1Q6ZMK1 362 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 DBX2Q6ZNG2 339 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 TIFABQ6ZNK6 161 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 NEK10Q6ZWH5 1172 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 UBE2R2Q712K3 238 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CCDC91Q7Z6B0 441 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 GOLGA6L1Q8N7Z2 621 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 GPR156Q8NFN8 814 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 OR5AR1Q8NGP9 310 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 MAGEC3Q8TD91 643 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 KCTD4Q8WVF5 259 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 ANKRD49Q8WVL7 239 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 SH3KBP1Q96B97 665 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 FAM122AQ96E09 287 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CABS1Q96KC9 395 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 SCYL1Q96KG9 808 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 CAMK1GQ96NX5 476 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 HGH1Q9BTY7 390 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 TRIM54Q9BYV2 358 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 SLC32A1Q9H598 525 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 MVB12BQ9H7P6 319 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 PCMTD2Q9NV79 361 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 LRIT1Q9P2V4 623 aa9.91□□□□□ -0.82
CPSF7-221ENST00000543545 PTPRZ1P23471 2315 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-221ENST00000543545 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 MYLKQ15746 1914 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 A0A1W2PPM1 405 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 NPEPPSL1A6NEC2 478 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 FOXO6A8MYZ6 492 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 BTN3A1O00481 513 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 ZW10O43264 779 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 KDM1AO60341 852 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 RFPL1O75677 317 aa9.9□□□□□ -0.82
CPSF7-221ENST00000543545 C8GP07360 202 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms