RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 ZCCHC14Q8WYQ9 949 aaKnown RBP11.3□□□□□ -0.6
COPS7A-217ENST00000543537 CCT6BQ92526 530 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 DCUN1D1Q96GG9 259 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 ZNF514Q96K75 400 aaPredicted RBP11.3□□□□□ -0.6
COPS7A-217ENST00000543537 BMFQ96LC9 184 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 GPR78Q96P69 363 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 COPS8Q99627 209 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 SLC17A9Q9BYT1 436 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 FAM83DQ9H4H8 585 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 IL26Q9NPH9 171 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 IL1RAPL1Q9NZN1 696 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 FKBPLQ9UIM3 349 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 EMCNQ9ULC0 261 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 CRYL1Q9Y2S2 319 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 DHRS7Q9Y394 339 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
COPS7A-217ENST00000543537 CCDC78A2IDD5 438 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CFAP73A6NFT4 308 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 TARM1B6A8C7 271 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 G3V2L1 256 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SLC22A2O15244 555 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 PHGDHO43175 533 aaKnown RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 PCDH8O95206 1070 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 WISP3O95389 354 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 PIGNO95427 931 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 LDOC1O95751 146 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 UGT2B4P06133 528 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 PIRTP0C851 137 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 THEGLP0DJG4 465 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 FGF3P11487 239 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 ALOX15P16050 662 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CHRM3P20309 590 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 ACRV1P26436 265 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SPINT3P49223 89 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 ACADVLP49748 655 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 BNIP3Q12983 259 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CAMK2BQ13554 666 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 RCN2Q14257 317 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CSHL1Q14406 222 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SH2D4BQ5SQS7 431 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 LDLRAP1Q5SW96 308 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 DPPA4Q7L190 304 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 PROSER1Q86XN7 944 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 C10orf107Q8IVU9 208 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CENPLQ8N0S6 344 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 NXPE1Q8N323 547 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 TRAM1L1Q8N609 369 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 OR13H1Q8NG92 308 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 KCTD4Q8WVF5 259 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 NXNL1Q96CM4 212 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CNDP2Q96KP4 475 aaKnown RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 KLHL32Q96NJ5 620 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 RASSF4Q9H2L5 321 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SUDS3Q9H7L9 328 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CAB39LQ9H9S4 337 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SPATS2LQ9NUQ6 558 aaKnown RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 DNAJC28Q9NX36 388 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 MARCH4Q9P2E8 410 aaPredicted RBP11.29□□□□□ -0.6
COPS7A-217ENST00000543537 CELSR3Q9NYQ7 3312 aa11.29□□□□□ -0.6
COPS7A-217ENST00000543537 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 STX16-NPEPL1H3BU86 382 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 TOR1BO14657 336 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 STX16O14662 325 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 AURKAO14965 403 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 KERAO60938 352 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 PIAS2O75928 621 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 CLDN7O95471 211 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 MLYCDO95822 493 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 GIMD1P0DJR0 217 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 EZRP15311 586 aaKnown RBP11.28□□□□□ -0.6
COPS7A-217ENST00000543537 BPIP17213 487 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 CKMT2P17540 419 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 ACP1P24666 158 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 FMO4P31512 558 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 RABIFP47224 123 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
COPS7A-217ENST00000543537 PFN3P60673 137 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 KRT72Q14CN4 511 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 PROX2Q3B8N5 592 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 TECRLQ5HYJ1 363 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 FAM182AQ5T1J6 154 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 LRRC66Q68CR7 880 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 C16orf46Q6P387 395 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 NEK10Q6ZWH5 1172 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 ISCA2Q86U28 154 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 SERPINA9Q86WD7 417 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 CEP97Q8IW35 865 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 SLC25A45Q8N413 288 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 OR6K2Q8NGY2 324 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 OR4C6Q8NH72 309 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 MAGEB10Q96LZ2 347 aaPredicted RBP11.28□□□□□ -0.6
COPS7A-217ENST00000543537 BIRC8Q96P09 236 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 VPS35Q96QK1 796 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 P2RY12Q9H244 342 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 NPHS2Q9NP85 383 aa11.28□□□□□ -0.6
COPS7A-217ENST00000543537 SLCO1B3Q9NPD5 702 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms